Gene PC1_2329 details

Gene Information

• Locus tag: PC1_2329
• ID: 8133273
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Pectobacterium carotovorum subsp. carotovorum PC1
• Kingdom: Bacteria
• Replicon accession: NC_012917
• Strand: +
• Start bp: 2674088
• End bp: 2674603
• Gene Length: 516 bp
• Protein Length: 171 aa
• Translation table: 11
• GC content: 59%
• IMG OID: 644865610
• Product: RTX toxin-activating protein C
• Protein accession: YP_003017897
• Protein GI: 253688707
• COG category: [O] Posttranslational modification, protein turnover, chaperones
• COG ID: [COG2994] ACP:hemolysin acyltransferase (hemolysin-activating protein)

Plasmid Coverage information

• Num covering plasmid clones: 8
• Plasmid unclonability p-value: 0.444217
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGAAGATTC CTGTTAATGG CTATCAGTTA ACCGCCCCGC TGCTAGGCGG TCAGTTCAGC 
GAAGCGGAAG CACTTGGCGC GGCGGTCTGG CTGTGGATGC ATTCGGAACA GCACCGCGAT 
ATTCCGCTCA GTGTGCTGCC GACGCTGCTG CTGCCCGCCA TCAAACATCA GCAGTTTGTT 
ATTGCCAGCC GCGATGACAA ACCCATGTTT TTCCTCAGTT GGGCGTGGAT GGACGAAGAA 
GCGGAGCAGC GCTACCTCAC TGGTCCCGGC ATCCTGGTGC AACCGCAGGA CTGGACCAGC 
GGCAACCGCC TGTGGTTCCG CGACTGGGTC GCGCCATTCG GCGATCAGCA GGCATTTCGT 
CGCATCGTCG GCGGCACGCT GTTTCCCCAC TTATGTGGCC GTGCGCTGTA CCACAAAGGG 
GCGGAACGCG GACAACGGGT ACTCCAATTC CGTGGCGATG ACGTCACCCA GCAACAATTC 
AGACTCTGGC AGCAGAACAC GCCGCTGGTT GCTTAA 

 

Protein sequence

MKIPVNGYQL TAPLLGGQFS EAEALGAAVW LWMHSEQHRD IPLSVLPTLL LPAIKHQQFV 
IASRDDKPMF FLSWAWMDEE AEQRYLTGPG ILVQPQDWTS GNRLWFRDWV APFGDQQAFR 
RIVGGTLFPH LCGRALYHKG AERGQRVLQF RGDDVTQQQF RLWQQNTPLV A