Gene PC1_2326 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPC1_2326 
Symbol 
ID8133270 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePectobacterium carotovorum subsp. carotovorum PC1 
KingdomBacteria 
Replicon accessionNC_012917 
Strand
Start bp2669625 
End bp2670668 
Gene Length1044 bp 
Protein Length347 aa 
Translation table11 
GC content60% 
IMG OID644865607 
Producthypothetical protein 
Protein accessionYP_003017894 
Protein GI253688704 
COG category[S] Function unknown 
COG ID[COG3768] Predicted membrane protein 
TIGRFAM ID[TIGR01620] conserved hypothetical protein, TIGR01620 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAACGAAC CACTGAAACC CCGTGTCACG TTCGATGATG CTTCACCGCA AGAGCCGCTG 
CCGCAACTGC GTGCAGGATT AGCATTTGAC GAGCAGAGCG GCACGCCTTT TTCCCCCATT
AGTCGTGAAG AAGAAGTGCC GGAAGAAGGG GCAGCGGAAG AGGCGATCAG CGCGGCGCTG
CGGCCGAAGC GCAGCCTGTG GCGGCGTATG GTTATGGCGG GAATAGGGCT GTTTGGCGTC
AGTGCGCTGG CGCAGGGCGT GCAGTCGCTG CATAACGCCT GGATACAGCA GGATTGGATT
GCGCTGGGCG GCATTACCGC GGGTAGCCTG ATTGTGGCTG CGGGCGTCGG TTCGCTGGTC
GTCGAGTGGC GACGGCTCTA TCGTTTGCGG GAACGTGCTG AAGAGCGCGA CGTGGCCCGC
GATCTGCTAC ACAGTCATGG TGTCGGGCGT GGGCGTGAAT TCTGTGAAAA GCTGGCGCGG
CAGGCAGGGC TGGATAGCGG CCATCCAGCG ATACAGCGTT GGCAGGCTTC GCTCCATGAA
ACCCACAATG ACCGCGAAGT GCTAGAGCTT TATGCACGTC TGGTTCAGCC TGTACTGGAC
ACGCAGGCAC GGCGTGAAAT CAGCCGCTCG GCTGCGGAAT CTACCTTGAT GATCGCCGTC
AGTCCGTTAG CGCTGGTGGA TATGGCATTT ATCGCCTGGC GCAACCTACG CCTGATTAAC
CGTATTGCCG CGCTGTACGG AATCGAACTG GGCTATTTCA GTCGCATTCG CCTGTTCCGG
CTGGTGCTGA TCAATATCGC GTTTGCTGGC GCATCGGAGC TGGTACGGGA AATTGGCATG
GACTGGATGT CGCAGGATCT TGCCGCGCGG CTATCGACTC GGGCCGCACA GGGCATTGGC
GCGGGTCTGC TGACCGCACG TCTGGGCATC AAAGCGATGG AACTGTGCCG ACCGCTGCCG
TGGCTGGATG ACAAACCGCG CCTCGGTGAT TTCCGCCGCG AGCTGATTGG TCAGGTGAAA
GAAACGCTGC AAAAAGGGCG TTAG
 
Protein sequence
MNEPLKPRVT FDDASPQEPL PQLRAGLAFD EQSGTPFSPI SREEEVPEEG AAEEAISAAL 
RPKRSLWRRM VMAGIGLFGV SALAQGVQSL HNAWIQQDWI ALGGITAGSL IVAAGVGSLV
VEWRRLYRLR ERAEERDVAR DLLHSHGVGR GREFCEKLAR QAGLDSGHPA IQRWQASLHE
THNDREVLEL YARLVQPVLD TQARREISRS AAESTLMIAV SPLALVDMAF IAWRNLRLIN
RIAALYGIEL GYFSRIRLFR LVLINIAFAG ASELVREIGM DWMSQDLAAR LSTRAAQGIG
AGLLTARLGI KAMELCRPLP WLDDKPRLGD FRRELIGQVK ETLQKGR