| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PC1_2325 |
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| Symbol | |
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| ID | 8133269 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pectobacterium carotovorum subsp. carotovorum PC1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012917 |
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| Strand | - |
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| Start bp | 2667920 |
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| End bp | 2669464 |
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| Gene Length | 1545 bp |
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| Protein Length | 514 aa |
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| Translation table | 11 |
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| GC content | 54% |
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| IMG OID | 644865606 |
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| Product | peptidase dimerisation domain protein |
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| Protein accession | YP_003017893 |
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| Protein GI | 253688703 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0624] Acetylornithine deacetylase/Succinyl-diaminopimelate desuccinylase and related deacylases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGATTCTCG ATAAAAAATT GACGCTGGCA GCACTGTCGC TGTCGGCCGC CATTTTCTGC
TTACCTGCCA GCGCACAGCT GGTGCTGACA CCTGCCGATG CTGAGCGTTA CGCGCAAAAC
AGTTTTCCTG AATATCTCGA ATTACTCACG CTGCCTAATG ATGCAGCCGT GCCTGCGGAT
ATCCAGCGCA ATGCTGGCTG GCTGGAAAAG GCTTTTCAGA AGCGCGGCTT CACCACGCAG
CAACTGGCGA ATGGTGATAA ACCGCTGGTT TATGCTGAGC TAGGCACGCC AAAAGCCGAT
CGTAAAACCA TCTTATTTTA CATGCATTTT GACGGGCAGC CTGTGAATCC GACCGAATGG
CAAACGCCGC CGTGGCAGCC CGTGTTGAAA GAAAAAGATG CCGCGGGTCA ATGGCAGACG
CTGCCTGAAT CACGTCTTCT GAAAGGAGAC ATCAACCCGG AATGGCGTCT TTTTGCCCGT
GCGTCCGCTG ATGATAAAGG GCCGATTGCG ATGTTTCTCG CCGCTATGGA TGCGATGAAA
GATAAAGGCG TTGAACCCGC CGTCAACATC AAGGTGCTGC TGGACTCCGA AGAGGAAAAG
GGCTCACCCG GCCTGACGAC GGTGATGGCC GAACATTTGA CGCTGCTGAA AAGCGATGGG
ATGGTGATTT ATGACGGTGC GATGCCATCC AGCAATCGCC CTGGCATCAA CTTCGGCAAC
CGTGGTTCCA TTCAAATCGA TATGACAGTT TTCGGTGCTA ACGCGGCAGC GCACAGCGGC
GGCTATGGCA ATGTTATTCC GAATCCGGTG CAAAATCTGG TTACGCTGCT CGCCAGCATG
AAAGATGCGG ACGGTAAGGT TACGATCCCT GGCTATTATG ACCGCGTCAC GCTTAGCGAT
AGCGATAAAA AACAGGTAGC GGAAACTGCA CCACCTGCGG GTTCGCTGGA AAAACGCTTT
GGTGTGTCTC AGTTAGAGAA GGTCGCCAGC AATGCGGCAG AGGCAGTGCA ATATCCTTCG
CTGGATATTC TCGGTATTAA AGCGGGCGAT ACAGGAAAAA AAGCGGCTAA TGCCATTCCG
GCAACCGCAA CGGCCAGCGT GAATATTCGT ACCGTGCCGG AGACGTCGCC GGATGATATG
TATGCCCTGT TACGTCAGTA TATCGCCAGC AAAGGTTTTC ATATCATTGC GGGCGAAGCC
CCTACGCAGG CTGAGCGCGA GCAGTATCCG CATTTGATTT CCCTTCATCT GACGGCGTAT
CCGAGCAGTG CCTATGCGGC CAGAACCGAG ATCGATTCTC CTCTGGGGCG CTGGGCGGTC
GCGACCACAA CCGCGCCGCG CGGCATCGCA CCGGAGAAGA ACCGTATGAT GGGCGGAACG
TTGCCAATGA GCGGGGCGGT CAGCGTGTTG AAAGTGCCTT ACGTCATTGT TCCTCTGGTG
AATGCCGATA ATAACCAGCA TAGTTTTGAT GAGAATTTAC GTCTCGGTAA CTACCTGGAA
GGCGTTCGAA CTATTGTGAC GATGGCCACG ACGCCGCTGC CATAA
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| Protein sequence | MILDKKLTLA ALSLSAAIFC LPASAQLVLT PADAERYAQN SFPEYLELLT LPNDAAVPAD
IQRNAGWLEK AFQKRGFTTQ QLANGDKPLV YAELGTPKAD RKTILFYMHF DGQPVNPTEW
QTPPWQPVLK EKDAAGQWQT LPESRLLKGD INPEWRLFAR ASADDKGPIA MFLAAMDAMK
DKGVEPAVNI KVLLDSEEEK GSPGLTTVMA EHLTLLKSDG MVIYDGAMPS SNRPGINFGN
RGSIQIDMTV FGANAAAHSG GYGNVIPNPV QNLVTLLASM KDADGKVTIP GYYDRVTLSD
SDKKQVAETA PPAGSLEKRF GVSQLEKVAS NAAEAVQYPS LDILGIKAGD TGKKAANAIP
ATATASVNIR TVPETSPDDM YALLRQYIAS KGFHIIAGEA PTQAEREQYP HLISLHLTAY
PSSAYAARTE IDSPLGRWAV ATTTAPRGIA PEKNRMMGGT LPMSGAVSVL KVPYVIVPLV
NADNNQHSFD ENLRLGNYLE GVRTIVTMAT TPLP
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