| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PC1_2319 |
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| Symbol | |
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| ID | 8133263 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pectobacterium carotovorum subsp. carotovorum PC1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012917 |
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| Strand | - |
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| Start bp | 2659783 |
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| End bp | 2661399 |
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| Gene Length | 1617 bp |
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| Protein Length | 538 aa |
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| Translation table | 11 |
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| GC content | 53% |
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| IMG OID | 644865600 |
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| Product | extracellular solute-binding protein family 5 |
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| Protein accession | YP_003017887 |
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| Protein GI | 253688697 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG4166] ABC-type oligopeptide transport system, periplasmic component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCACTCTA GATATTCTGC ATTTTATGTC GCGTTGATGG CGGCCATGGC GGGCAATGCC
GTCGCGGCAC AGGTTCCGGC AGGAACGGCT CTGGCCGAAA AACAGGAAAT CATCCGCCAC
ATTAAAGATG AACCGGCTTC TCTCGATCCG ATAAAAGCGG TGGGGCTGCC GGAAGCACAG
GTAGCACGCG ACCTGTTTGA AGGGTTGGTC AATCAGGATG CCAAGGGGAA CATCGTTCCG
GGCGTAGCGC TACGCTGGCA GACGACCGAT AACCGCACGT TTGTCTTTAC CTTGCGTGAT
AATGCCCGCT GGTCTAACGG TGACCCCGTT ACGGCAAACG ATTTTGTCTA CAGTTGGCGC
CGTCTGGTGA CACCTGAAAA CAGCTCGCCG TTCTCCTGGT TTGCCCGGCT TGCAGGAATT
CAGAATGCCG AGCAGATTCT GGCGGGCAAA CTGCCTGCCG ATCAGCTTGG CGTGACGGCG
GTCAATGACC ATACGCTGAA AGTGCAGCTC AGCAAGCCAG TCCCTTATTT TGTCAGCCTG
ACGGCGAATT TCAGCCTGTT TCCGGTACAT CAGGCCACGG TAGAAAAATT CGGGAACGAC
TGGACGAAGC CGGGTAACCT GGTTGGCAAT GGCGCGTTTA AGCTGGATCA GCGCGTGGTG
AATGAGAAAC TGGTGCTGAC GCAGAATCAA TATTATTGGG ATAACGCCAA CACCCACCTG
ACAAAGGTGA CCTTTGTTCC CATCAATCAG GAATCGAACG CGACAAAACG CTACTTGTCC
GGGGATATTG ATATCACCGA ATCGTTCCCT AAAAACCTGT ATCAAAAGCT GCTGCAAGAT
TTGCCCGGTC AGGTTTATAC GCCGGATCAG CTTGGCACGT ATTATTACGC ATTTAACACC
CAGCGGGCGC CGACCAACGA TGCCCGAGTA AGAAAAGCGC TGTCTTACGC TATCGATCGC
AAGGTGATTG CGGAAAAAGT ACTGGGAACG GGGGAAAAAC CGGCCTGGCA CTTCACGCCG
GATGTCACCG CAGGCTTCAA ACCGACGGAA AGCCTGTTGC AACAGTATTC TCAGGATGAA
CTGGATGCGC AGGCAAAAGC GCTGATGGCG GCGGCGGGCT ATGGTCCAAA TAATCCTCTG
AAATTATCGC TGCTGTACAA CACCTCAGAA AGCCACCAAA AAATCGCAAT TGCCGTGGCG
TCCATGTGGA AGAAAACGCT GGGGGTTGAC GTCCGTCTGT CCAACCAAGA GTGGCAAACC
TACATCGACA GTCGCAATAG CGGTAATTTT GATGTCGTGC GGGCGTCCTG GGTGGGGGAT
TATAACGAGC CGTCGACATT CCTCTCACTA CTGACTTCGC ACCATAGCGG TAACATCGCG
CGCTTTAAAA ATGCGAATTA CGATCGCGTA CTGGATGAAG CGGGTAATCA AACTAACCCG
CAGGCGCTGA ATGCCGACTA TAACCGGGCA GAGCAGATAT TGATGGATGA AGCACCGATT
GCGCCGATCT ATCAATATAC CAACGGACGT TTGATCAAAC CGTGGGTGAA AGGTTACCCC
ATTACTAATC CTGAAGACGT GGCCTACAGC CATATGCTTT ACATCGAGAA GCATTAA
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| Protein sequence | MHSRYSAFYV ALMAAMAGNA VAAQVPAGTA LAEKQEIIRH IKDEPASLDP IKAVGLPEAQ
VARDLFEGLV NQDAKGNIVP GVALRWQTTD NRTFVFTLRD NARWSNGDPV TANDFVYSWR
RLVTPENSSP FSWFARLAGI QNAEQILAGK LPADQLGVTA VNDHTLKVQL SKPVPYFVSL
TANFSLFPVH QATVEKFGND WTKPGNLVGN GAFKLDQRVV NEKLVLTQNQ YYWDNANTHL
TKVTFVPINQ ESNATKRYLS GDIDITESFP KNLYQKLLQD LPGQVYTPDQ LGTYYYAFNT
QRAPTNDARV RKALSYAIDR KVIAEKVLGT GEKPAWHFTP DVTAGFKPTE SLLQQYSQDE
LDAQAKALMA AAGYGPNNPL KLSLLYNTSE SHQKIAIAVA SMWKKTLGVD VRLSNQEWQT
YIDSRNSGNF DVVRASWVGD YNEPSTFLSL LTSHHSGNIA RFKNANYDRV LDEAGNQTNP
QALNADYNRA EQILMDEAPI APIYQYTNGR LIKPWVKGYP ITNPEDVAYS HMLYIEKH
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