| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PC1_2294 |
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| Symbol | |
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| ID | 8133238 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pectobacterium carotovorum subsp. carotovorum PC1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012917 |
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| Strand | + |
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| Start bp | 2642757 |
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| End bp | 2643764 |
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| Gene Length | 1008 bp |
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| Protein Length | 335 aa |
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| Translation table | 11 |
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| GC content | 53% |
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| IMG OID | 644865581 |
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| Product | D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding |
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| Protein accession | YP_003017868 |
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| Protein GI | 253688678 |
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| COG category | [C] Energy production and conversion
[H] Coenzyme transport and metabolism
[R] General function prediction only |
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| COG ID | [COG1052] Lactate dehydrogenase and related dehydrogenases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGAAACTGG CAATTTACAG CACCAAGCAG TATGACCGTA AATATCTGGA GCAGGTCAAT
CAGCAGTTTG GCTATGAGCT GGAGTTTTTT GATTTCATGC TGACATCGCG CACCGCGAAA
ACAGCCGCGG GCTGTCAAGC TGTCTGCATC TTTGTGAACG ACGACGGTGG TCGCGAGGTG
TTAACCGAGC TGGCAGAGAT GGGCATTAAA ACGCTGGCGC TACGTTGTGC AGGCTTTAAC
AACGTCGATT TGGACGCGGC GAAGGAACTG GGCATCAGTG TGGTGCGCGT TCCCGCGTAT
TCCCCTGAAG CCGTCGCCGA GCACGCCGTC GGATTGATGC TGACGCTTAA CCGCCGTATT
CACCGCGCCT ATCAGCGTAC TCGCGATGCG AACTTCTCTC TGGAAGGGCT GATTGGGTTC
AATATGCACA ACCGGACGGC GGGCATTATC GGCACCGGAA AAATCGGCAT CGCGACCATG
CGTATCCTGA AAGGTTTTGG CATGCGCCTG CTGGCCTTCG ATCCCTATCC GAACCCGCAG
GCATTGGAAT TAGGGGCAGA GTATGTCGAT CTGAAAACGC TGTATGCCAA CGCGGATGTC
ATCTCCCTGC ACTGCCCGCT GACGCCGGAG AATCATCACC TGCTGAATCA GGCAGCCTTT
GCACAAATGA AAAACGGCGT CATGATCGTC AATACCAGCC GTGGTGGACT GATCGACTCA
CAGGCGGCTA TCGACGCGCT GAAGCAACAG AAAATTGGCG CACTGGGTAT GGACGTTTAT
GAAAACGAGC GCGATCTCTT CTTTGCCGAT AAATCCAACG ATGTAATTCA GGACGATGTT
TTCCGCCGCT TGTCCGCGTG CCATAACGTA CTGTTCACCG GACATCAGGC ATTCCTGACG
GAAGAAGCGC TAATCAGCAT TTCTCAAACC ACGCTCCAGA ACCTCAAAGA CATCAGCCAG
AACATGCCTT GTGCAAATCT GGTTACATCT TTACCTTGTA TACCCTAA
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| Protein sequence | MKLAIYSTKQ YDRKYLEQVN QQFGYELEFF DFMLTSRTAK TAAGCQAVCI FVNDDGGREV
LTELAEMGIK TLALRCAGFN NVDLDAAKEL GISVVRVPAY SPEAVAEHAV GLMLTLNRRI
HRAYQRTRDA NFSLEGLIGF NMHNRTAGII GTGKIGIATM RILKGFGMRL LAFDPYPNPQ
ALELGAEYVD LKTLYANADV ISLHCPLTPE NHHLLNQAAF AQMKNGVMIV NTSRGGLIDS
QAAIDALKQQ KIGALGMDVY ENERDLFFAD KSNDVIQDDV FRRLSACHNV LFTGHQAFLT
EEALISISQT TLQNLKDISQ NMPCANLVTS LPCIP
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