Gene PC1_2287 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPC1_2287 
Symbol 
ID8133231 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePectobacterium carotovorum subsp. carotovorum PC1 
KingdomBacteria 
Replicon accessionNC_012917 
Strand+ 
Start bp2630028 
End bp2630873 
Gene Length846 bp 
Protein Length281 aa 
Translation table11 
GC content54% 
IMG OID644865574 
Productputative protease 
Protein accessionYP_003017861 
Protein GI253688671 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones5 
Plasmid unclonability p-value0.12246 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACTCTTC TTACTTCGCA GGATGAGCTC GCTATCAGAA ACGCCATGGC GCTACTGGAA 
GCCCCCTCTT TTGCCATACA GGCAGCGAGT CTGGTTGGAA AACCGATTGA ATGGAGCCTA 
TCGAAATTAC CCGCCCTGGT GAAAAACAAA ATACAGGATG TGGTTCACAC GGCGTTGTAC 
AAAGCGGTAG ACGCTGCGCT CTATACGCTG GACGATGCGC CCGCTCGCGT GGCGTCGCCA 
AAGACACATA AACTGGCCGT CGCCGCTTCC GGTGCGGTCA GCGGCTTTTT TGGTGCAGCC 
GGTCTGCTGG TCGAACTGCC TATCAGCACG ACGATCATGA TGCGTTCCGT GGCGGACATC 
GCCCGCAGCG AAGGTTTCTC CCTCAGCGAT CTTTCCGTTA AAGCCGCTTG TGTGGAAGTT 
TTCGCGCTCG GTGGAACACA AGAAAGCGAT GATGCTGCCG ATTCGGCCTA TTACACCTCA 
CGCACCGTTC TGGCTGATAT CACCAAACAT GCCAGCCGCG AATTAATCGG CATTGCTGGC 
AAAAAAAGCG CAGGGAAAGC CTCTGCAAGA ATGAGCACCT CACAGGCAGG AAAAACGCTG 
GCAAAGCTGA TTGATGCCGT CGCAACCAGA CTCGGTGTGA CCATGACAGA GAAAATGGCC 
GCACAGATTG TCCCAGTGAT TGGCGCTGCC AGCGGCGCCG CCATCAATAC GCTGTTTATC 
CACCACTACC AAAACATGGC GAAAGGCCAT TTCATCATAA AACGTCTGGA ACAGACCTAT 
GGTGAAGAGG CAATCAGGTC GGCTTATCTG GAGCTAAAAA ACAACCGTCG CGACCTGATG 
GAATAA
 
Protein sequence
MTLLTSQDEL AIRNAMALLE APSFAIQAAS LVGKPIEWSL SKLPALVKNK IQDVVHTALY 
KAVDAALYTL DDAPARVASP KTHKLAVAAS GAVSGFFGAA GLLVELPIST TIMMRSVADI 
ARSEGFSLSD LSVKAACVEV FALGGTQESD DAADSAYYTS RTVLADITKH ASRELIGIAG 
KKSAGKASAR MSTSQAGKTL AKLIDAVATR LGVTMTEKMA AQIVPVIGAA SGAAINTLFI 
HHYQNMAKGH FIIKRLEQTY GEEAIRSAYL ELKNNRRDLM E