| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PC1_2282 |
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| Symbol | |
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| ID | 8133226 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pectobacterium carotovorum subsp. carotovorum PC1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012917 |
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| Strand | - |
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| Start bp | 2624212 |
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| End bp | 2624916 |
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| Gene Length | 705 bp |
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| Protein Length | 234 aa |
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| Translation table | 11 |
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| GC content | 51% |
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| IMG OID | 644865569 |
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| Product | Pili assembly chaperone, N-terminal |
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| Protein accession | YP_003017856 |
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| Protein GI | 253688666 |
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| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG3121] P pilus assembly protein, chaperone PapD |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.578603 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGCAGAACT CATCTCTCTT ATTTCAATCT TTCACCTTCG GTCTGGTGCT TTTTGCTTTA
TTGACGGTTC ATCAGGCACA GGCGGGGGGG ATTGCGCTGG GCGCTACGCG GGTGATCTAC
TCCGCAGAGG CCAATCAGGC TTCACTTTCG ATTATTAACA GTGATGAAAA TAACCGCTTT
TTGATTCAAT CCTGGGTAGA AGATAAAGAC GGGAATAAAA CCAAAGATTT TCTGGCGACC
CCTCCGCTTT TTGTGGTGAA ACCCAAAGGT GAGAACACAT TGCGACTGAT GTATGTCGGT
ACACCTTTGC CTACCGATCG CGAATCCGTT TATTGGGTCA ATGTCAAAGC GATTCCGGCG
GTTGAGAAAC GATCGCTGGA GGATAAAAAC GCGCTGCAAT TGGCGGTGTT ATCTCGCATT
AAACTTTTTG TCAGACCCGC TAATCTTCCC ACGGGGGCCG ATAGCGCACC CGCGACGCTA
CGTTTCCAGC AGTCAGGCTC GGCGCTCACG ATCACCAACC CCTCTCCTTA TTTTATTACG
CTGGTCAACC TCCAGTCTGG CAGCCAGAAA CTTCCCAACA CGATGGTGCC GCCAAAAGGT
TCGACATCAC TGACGCTGTC TGGGGGAGCA CCCGGTGCGG TGAGTTTCCA GACCATTAAC
GATTACGGAG CCATGACGCC ACGCGTCACA GGTAAAGGGC TATGA
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| Protein sequence | MQNSSLLFQS FTFGLVLFAL LTVHQAQAGG IALGATRVIY SAEANQASLS IINSDENNRF
LIQSWVEDKD GNKTKDFLAT PPLFVVKPKG ENTLRLMYVG TPLPTDRESV YWVNVKAIPA
VEKRSLEDKN ALQLAVLSRI KLFVRPANLP TGADSAPATL RFQQSGSALT ITNPSPYFIT
LVNLQSGSQK LPNTMVPPKG STSLTLSGGA PGAVSFQTIN DYGAMTPRVT GKGL
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