Gene PC1_2280 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPC1_2280 
Symbol 
ID8133224 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePectobacterium carotovorum subsp. carotovorum PC1 
KingdomBacteria 
Replicon accessionNC_012917 
Strand
Start bp2620454 
End bp2621503 
Gene Length1050 bp 
Protein Length349 aa 
Translation table11 
GC content51% 
IMG OID644865567 
Producthypothetical protein 
Protein accessionYP_003017854 
Protein GI253688664 
COG category[N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport 
COG ID[COG3539] P pilus assembly protein, pilin FimA 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAATTAC TAACGAAAAA GAAAAGTGGC GCAACGCGAA GCGCTATGTG GTGGCGCGGC 
GTTAGCGTGG CGGGTTTGTT GGGGATTGCC AGTCAGGCCA GTGCGATACA ATGCACGACC
TCAAGTGGTT CACCTTTAAC GTATGACTAC ACTTACGCGC TGGCTTCCAC TCAGAACAAT
GTCGGATATG TTACCGGGTG GAATGAAAAA ACCGATGCAG GTTCCTATGC GATAAGTGGC
CCATGTAATA ACCGAGATAC GGTCTACTAT TCCGCCCGGT CCGGCCCATC GTTGGTTTTG
GCATCAACGG AAAGCGGCGT GAACTGGTTT GATATTACCG GCAATGATTA TCTCCAGGTG
GCATCGCGTA TTTTTGTTTA TAACCGCACC TCGGCGGGCA TTTTTCATAA TGTGCCGTTT
ACCGATGTGA GCAACAACTG TGATGGACTG TGCGGTGGGA ATGCGACAAC GGGCAGTCGG
GTTCAGGTAA ATTTCCGTAT CAAACGCAAG TTTGTCGGGG TTTCCAATAT CCCGATGACA
CCCATTTTTT ACCTTTATGG CAATCAGGGA GGTAGTGGGC AAAGCGTGGG GTCGCCACTG
GTGGTTGGCT ACATGAGCGG TTCGGTCACG GTTCCTCAAA GTTGCGTTTT GAATGCGGGT
CAGATCATCA GCATTGATTT TGGCGGAATT TCATCAGGGG CGTTTAAAAC GGTGGGTGAA
AAACCGGAGG GGGTTCCACC GGTGACGCGG ACGATTGGTA TCGCCTGCAA CGGTATCGAT
GCACAGGCGA GTATGTCGAT GCGTCTTCAG GCTGATAAAT CGTCTGGCAA TATGGTGGTT
TCTGACAATC CTGACGTCGG CTTTATTGTT ACAGACAGTG GAAGTAATCC ATTGACGCCC
AATGATATTG CGAGCGTGAT TCCTTTTACG CTGGATGAGG CAGCAAGTGC CAATGTGGCG
ATTACTGCGT ATCCGGTCAG TGTGACGGGG ACTAAGCCCC AGGAAGGCGT CGCGACAGCA
AATGCCTATC TGCGCGTCGA TTTTTACTAA
 
Protein sequence
MKLLTKKKSG ATRSAMWWRG VSVAGLLGIA SQASAIQCTT SSGSPLTYDY TYALASTQNN 
VGYVTGWNEK TDAGSYAISG PCNNRDTVYY SARSGPSLVL ASTESGVNWF DITGNDYLQV
ASRIFVYNRT SAGIFHNVPF TDVSNNCDGL CGGNATTGSR VQVNFRIKRK FVGVSNIPMT
PIFYLYGNQG GSGQSVGSPL VVGYMSGSVT VPQSCVLNAG QIISIDFGGI SSGAFKTVGE
KPEGVPPVTR TIGIACNGID AQASMSMRLQ ADKSSGNMVV SDNPDVGFIV TDSGSNPLTP
NDIASVIPFT LDEAASANVA ITAYPVSVTG TKPQEGVATA NAYLRVDFY