Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PC1_2280 |
Symbol | |
ID | 8133224 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pectobacterium carotovorum subsp. carotovorum PC1 |
Kingdom | Bacteria |
Replicon accession | NC_012917 |
Strand | - |
Start bp | 2620454 |
End bp | 2621503 |
Gene Length | 1050 bp |
Protein Length | 349 aa |
Translation table | 11 |
GC content | 51% |
IMG OID | 644865567 |
Product | hypothetical protein |
Protein accession | YP_003017854 |
Protein GI | 253688664 |
COG category | [N] Cell motility [U] Intracellular trafficking, secretion, and vesicular transport |
COG ID | [COG3539] P pilus assembly protein, pilin FimA |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 10 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAAATTAC TAACGAAAAA GAAAAGTGGC GCAACGCGAA GCGCTATGTG GTGGCGCGGC GTTAGCGTGG CGGGTTTGTT GGGGATTGCC AGTCAGGCCA GTGCGATACA ATGCACGACC TCAAGTGGTT CACCTTTAAC GTATGACTAC ACTTACGCGC TGGCTTCCAC TCAGAACAAT GTCGGATATG TTACCGGGTG GAATGAAAAA ACCGATGCAG GTTCCTATGC GATAAGTGGC CCATGTAATA ACCGAGATAC GGTCTACTAT TCCGCCCGGT CCGGCCCATC GTTGGTTTTG GCATCAACGG AAAGCGGCGT GAACTGGTTT GATATTACCG GCAATGATTA TCTCCAGGTG GCATCGCGTA TTTTTGTTTA TAACCGCACC TCGGCGGGCA TTTTTCATAA TGTGCCGTTT ACCGATGTGA GCAACAACTG TGATGGACTG TGCGGTGGGA ATGCGACAAC GGGCAGTCGG GTTCAGGTAA ATTTCCGTAT CAAACGCAAG TTTGTCGGGG TTTCCAATAT CCCGATGACA CCCATTTTTT ACCTTTATGG CAATCAGGGA GGTAGTGGGC AAAGCGTGGG GTCGCCACTG GTGGTTGGCT ACATGAGCGG TTCGGTCACG GTTCCTCAAA GTTGCGTTTT GAATGCGGGT CAGATCATCA GCATTGATTT TGGCGGAATT TCATCAGGGG CGTTTAAAAC GGTGGGTGAA AAACCGGAGG GGGTTCCACC GGTGACGCGG ACGATTGGTA TCGCCTGCAA CGGTATCGAT GCACAGGCGA GTATGTCGAT GCGTCTTCAG GCTGATAAAT CGTCTGGCAA TATGGTGGTT TCTGACAATC CTGACGTCGG CTTTATTGTT ACAGACAGTG GAAGTAATCC ATTGACGCCC AATGATATTG CGAGCGTGAT TCCTTTTACG CTGGATGAGG CAGCAAGTGC CAATGTGGCG ATTACTGCGT ATCCGGTCAG TGTGACGGGG ACTAAGCCCC AGGAAGGCGT CGCGACAGCA AATGCCTATC TGCGCGTCGA TTTTTACTAA
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Protein sequence | MKLLTKKKSG ATRSAMWWRG VSVAGLLGIA SQASAIQCTT SSGSPLTYDY TYALASTQNN VGYVTGWNEK TDAGSYAISG PCNNRDTVYY SARSGPSLVL ASTESGVNWF DITGNDYLQV ASRIFVYNRT SAGIFHNVPF TDVSNNCDGL CGGNATTGSR VQVNFRIKRK FVGVSNIPMT PIFYLYGNQG GSGQSVGSPL VVGYMSGSVT VPQSCVLNAG QIISIDFGGI SSGAFKTVGE KPEGVPPVTR TIGIACNGID AQASMSMRLQ ADKSSGNMVV SDNPDVGFIV TDSGSNPLTP NDIASVIPFT LDEAASANVA ITAYPVSVTG TKPQEGVATA NAYLRVDFY
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