Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PC1_2271 |
Symbol | |
ID | 8133215 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pectobacterium carotovorum subsp. carotovorum PC1 |
Kingdom | Bacteria |
Replicon accession | NC_012917 |
Strand | + |
Start bp | 2612156 |
End bp | 2612632 |
Gene Length | 477 bp |
Protein Length | 158 aa |
Translation table | 11 |
GC content | 56% |
IMG OID | 644865558 |
Product | RNA polymerase, sigma-24 subunit, ECF subfamily |
Protein accession | YP_003017845 |
Protein GI | 253688655 |
COG category | [K] Transcription |
COG ID | [COG1595] DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog |
TIGRFAM ID | [TIGR02937] RNA polymerase sigma factor, sigma-70 family |
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Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | TTGACGCGCC TATGGCGCTA TGGACTGGTG CTGTCGCGTA GCCATGAAGT TGCCGAAGAG CTGGTCCAGT CTACCTGCGT TCGGGCGCTC GAAAAGAGTA CGCAATTTAT ACCCGGCACG CGTATCGACA GATGGCTGTT CTCCATTCTC CATTCAATAT GGATTTCCGA ACTGCGCGCC CGTCGCGTGC GTCAGGGACA GGGGTTTATC GAAAGCGAAG CATTGCTGGC CCCGGATACC CATGAGCAGG ATGACAATCG CCTGCATTAC CAGAAAATCA TGCAGCGCGT CAGCGCGCTT CCCGAAGCAC AGCGCAACAC CGTCTTTTTA GTTTATGTCG AAGGGTTTTC CTATCAGGAA GCGGCAGACA CGCTATCGGT GCCGATCGGC ACCATTATGA GCCGACTGGC TGCCGCACGG GGTACGCTGG CTAAATCCAT TGATACGTTG CCCTCGGCAA AGGAGAAACT GCCTTGA
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Protein sequence | MTRLWRYGLV LSRSHEVAEE LVQSTCVRAL EKSTQFIPGT RIDRWLFSIL HSIWISELRA RRVRQGQGFI ESEALLAPDT HEQDDNRLHY QKIMQRVSAL PEAQRNTVFL VYVEGFSYQE AADTLSVPIG TIMSRLAAAR GTLAKSIDTL PSAKEKLP
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