Gene PC1_2267 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPC1_2267 
Symbol 
ID8133211 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePectobacterium carotovorum subsp. carotovorum PC1 
KingdomBacteria 
Replicon accessionNC_012917 
Strand+ 
Start bp2607802 
End bp2608902 
Gene Length1101 bp 
Protein Length366 aa 
Translation table11 
GC content55% 
IMG OID644865554 
Productcalcium/sodium:proton antiporter 
Protein accessionYP_003017841 
Protein GI253688651 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG0387] Ca2+/H+ antiporter 
TIGRFAM ID[TIGR00846] calcium/proton exchanger 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAGTCTC ATGCTGAGGT GGTCAAAACT CGCCATCATG AATACTCACT CATTTTTCCT 
GTTATTGCGC TGGCCGTGCT CTACATGTGG GGCAGTTCAC AAGATTTCAT CGCTATTCTC 
GGCATCAACG CCCTTGCGTT AGCCGGAATA CTTTTCAGCG CGTTCAGCGT GGTACGTCAC 
GCCGACGTGC TCGCGCACCG TCTGGGTGAA CCCTACGGAT CGCTGATCCT CAGCCTGTCC 
GTTGTCATTC TGGAAGTCAG CCTGATTTCA GCGCTGATGG CAACCGGTGA CGCTGGCCCA 
GACCTGATGC GTGACACCCT CTATTCGATT ATCGTGATTG TCACCGGTGG CCTGGTGGGC 
TTCGCCCTCT TACTCGGCGG CCGCAAATTC GCTACACAAT ATGTCAATCT CAGCGGCATC 
AAGCAGTACC TGATGGCGAT CTTCCCGTTG GCCGTGATTG TGCTGGTTTT CCCCAGCGCG 
TTGCCAGATG GTAATTTCAG CGTAGCGCAG TCGCTGATTA TTGCCGCTAT TTCTGCGGCG 
ATGTACGGCG TGTTCCTGTT GATTCAAACG CGTACGCACC AAAGCCTGTT TGTGTATGAG 
CACGAAGACG AAGGCGATGG CGATGACCCT CATCACGGTA AACCATCCGC ACACAGTTCG 
CTATGGCACA CTGGCTGGCT CCTGATTCAC CTGATTGCCG TTATCGCGGT AACCAAAATG 
AACTCCATGC CGCTGGAAGC GCTGCTGACC GAAATGAACG CGCCGACGCA GTTTACGGGC 
TTCCTGGTTG CGTTGTTAAT CCTCTCGCCT GAAGGGCTGG GAGCGATCCG CGCCGTCCTG 
AAAAATCAGG TGCAGCGTGC CATGAACCTG TTTTTCGGCT CCGTGCTGGC AACCATTTCA 
CTGACGGTCC CTACCGTTAC GATCATTGCC ATGATTACCG GCCGTACGCT GAACTTCGGT 
CTGGATATGC CGCACATTGT CGTGATGCTG TCGGTGCTGG TGCTATGTCA CATTACGTTC 
TCCACCGGTA GAACCAACGT ATTAAGCGGC AGCGCACACC TGGCGCTCTT TGCCGCCTAT 
CTGATCACCA TCACACTGTA A
 
Protein sequence
MKSHAEVVKT RHHEYSLIFP VIALAVLYMW GSSQDFIAIL GINALALAGI LFSAFSVVRH 
ADVLAHRLGE PYGSLILSLS VVILEVSLIS ALMATGDAGP DLMRDTLYSI IVIVTGGLVG 
FALLLGGRKF ATQYVNLSGI KQYLMAIFPL AVIVLVFPSA LPDGNFSVAQ SLIIAAISAA 
MYGVFLLIQT RTHQSLFVYE HEDEGDGDDP HHGKPSAHSS LWHTGWLLIH LIAVIAVTKM 
NSMPLEALLT EMNAPTQFTG FLVALLILSP EGLGAIRAVL KNQVQRAMNL FFGSVLATIS 
LTVPTVTIIA MITGRTLNFG LDMPHIVVML SVLVLCHITF STGRTNVLSG SAHLALFAAY 
LITITL