| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PC1_2259 |
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| Symbol | |
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| ID | 8133203 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pectobacterium carotovorum subsp. carotovorum PC1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012917 |
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| Strand | - |
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| Start bp | 2593978 |
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| End bp | 2597784 |
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| Gene Length | 3807 bp |
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| Protein Length | 1268 aa |
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| Translation table | 11 |
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| GC content | 56% |
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| IMG OID | 644865546 |
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| Product | nitrate reductase, alpha subunit |
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| Protein accession | YP_003017833 |
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| Protein GI | 253688643 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG5013] Nitrate reductase alpha subunit |
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| TIGRFAM ID | [TIGR01580] respiratory nitrate reductase, alpha subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGCAAAT TCCTTGACCG GTTACGTTAC TTCAAACAAC TGGCCGAACC GTTTTCCGAT
GGTCATGGCC AGACCCTCAA TACCAATCGT GACTGGGAAG ACGGCTATCG CAGTCGCTGG
CAGCATGACA AAATCGTGCG TTCTACCCAC GGAGTAAACT GCACCGGTTC ATGTAGCTGG
AAGATTTATG TGAAAAACGG TCTGGTGACG TGGGAAACGC AGCAGACTGA CTATCCGCGT
ACCCGCCCGG ACCTGCCTAA CCATGAACCT CGCGGTTGCC CGCGTGGTGC CAGCTATTCC
TGGTATCTCT ACAGCGCTAA CCGCCTAAAA TATCCGATGA TGCGCAAGCG CCTGCTGAAA
TTGTGGCGTG AAGCGAAACT GACGCACAGC GATCCGGTGG ATGCCTGGGC ATCCATCGTC
AACGACCCCG AAAAAACCAA ATACTACAAA CAAATTCGTG GCCGTGGTGG CTTCGTTCGT
TCTGACTGGA ACGAAGTCAA CGAGCTGATC GCCGCCTCTA ACGTTTACAC CGCCAAGACC
TTCGGCCCAG ACCGTATTAT CGGTTTCTCC CCGATTCCTG CGATGTCAAT GGTGTCCTAC
GCCGCGGGTG CGCGTTACCT CTCTCTGCTC GGCGGCGTGT GCCTGAGCTT CTACGACTGG
TACTGTGACT TGCCGCCTGC GTCACCGATG ACGTGGGGCG AACAAACTGA CGTACCGGAG
TCTGCCGACT GGTATAACTC CTCTTACATC ATTGCCTGGG GTTCTAACGT TCCGCAAACC
CGTACCCCGG ATGCCCACTT CTTTACGGAA GTCCGCTACA AAGGCACCAA AACCGTAGCG
GTCACGCCGG ATTACGCTGA AATTGCCAAG CTGTGCGATC AGTGGCTGAA CCCGAAACAA
GGGACCGACA GCGCGATGGC GCTGGCAATG GGCCACGTTA TTCTCAAAGA GTTCCACCTC
GACAAACCAA GTCAGTATTT CAGCGAGTAC GTGCGCCAAT ACACGGACTT ACCGATGCTG
GTGATGCTGG AACCGCGCGA AGACGGTTAC TACGCGGCGG GTCGTATGCT GCGTGCCTCC
GATCTGGTGG ACAACCTCGG TCAGGACAAC AATCCGCAGT GGAAAACCAT CGCGATTGAC
GATGAAAGCG GCAACCTGAC GGCACCGCAA GGGTCGATCG GCTACCGTTG GGGCGATCAG
GGTAAATGGA ATCTGGAACA GCGCGACGGT CTGAGCGGTG AAGAAGTGAA ACTGCGCTTG
AGCCTGCTGG GGTCGCACGA CGATGTCGTT GATGTCGGCT TCCCGTATTT TGGCGGCGCG
GTCAGTGAAC ATTTCAACAA CGTTGAGCTA CAAGAAATTC TGCTGCACAA ACTGCCGGTT
AAGCGTTTGA CCTTGGCTGA CGGTAGCGAA GCGCTGGTTG CCTGCGTGTA TGACCTGACG
ATGGCGAACT ACGGTCTGGA TCGCGGTCTG GGTGATGACA ACTGCGCGCG AGATTACGAT
GATGTCAAAG CGTACAGCCC TGCCTGGGCC GAGGAAATTA CTGGCGTTTC TCGTCAGAAC
ATCATCCGTA TTGCACGTGA ATTCGCAGAC AACGCGGATA AAACGCACGG GCGCTCTATG
GTCATCGTCG GTGCGGGTAT CAACCACTGG TACCACATGG ACATGAACTA TCGCGGCATC
ATCAACATGC TGATTTTCTG CGGCTGTGTC GGCCAGAGCG GTGGCGGTTG GGCGCACTAC
GTCGGACAAG AAAAGCTGCG TCCGCAAACG GGCTGGACGC CGCTGGCGTT TGGTCTGGAC
TGGCAGCGTC CGCCGCGCCA CATGAACAGC ACGTCGTTCT TCTATAACCA TTCCAGCCAA
TGGCGTTATG AAACCGTCGC GCCGCAGGAG CTGCTGTCAC CGCTGGCGGA CAAATCCCGC
TTTAGCGGCA GCATGATTGA CTTCAACGTA CGTGCTGAAC GTATGGGCTG GCTGCCGTCT
GCGCCGCAAC TGAACGTTAA CCCGCTGGAT ATCGCGGAGA AAGCGCGGGC CGCGGGTGTA
ACGCCGCAGG ACTATACCGT TGCCGCGTTG AAATCAGGCG AAATCAAATT TGCCGCTGAA
CAGCCGGATA GTGAGCAAAA CTACCCACGC AACCTGTTCA TCTGGCGTTC TAACCTGTTG
GGTTCCTCCG GTAAAGGCCA CGAATACATG CTGAAGTACC TGCTGGGTAC GGAGCACGGT
ATTCAGGGGC AAGATCTGGG CACGGCAGGA AGCGTGAAGC CGGAAGAAGT GGAATGGCGC
GATCAGGGCG TTGAAGGCAA ACTGGATCTG GTGGTGACGC TTGATTTCCG CATGTCCAGC
ACCTGCCTGT ACTCCGACAT CGTTCTGCCA ACGGCAACCT GGTACGAAAA AGACGACATG
AATACCTCGG ATATGCATCC GTTTATTCAC CCGCTGTCTG CGGCCGTCGA TCCCGCATGG
GATTCCAAAA GCGACTGGGA AATCTACAAA GGTATCGCGA AAGCCTTCTC CCGCGTGTGT
CAGGGACATC TGGGTCAGGA AACCGATCTG GTGACCTTGC CGATTCAGCA CGACTCGGCT
GCGGAAATGG CGCAGCCGTT CGGTGTGGAT GACTGGAAAA AAGGCGAATG CGATCTGATT
CCGGGCAAAA CGGCACCGCA CCTGATGGTC GTGGAGCGCG ATTACCCGAA CCTGTACGAA
CGTTTCACCT CGCTCGGTCC GTTGATGGAC AAGCTGGGCA ACGGTGGTAA AGGCATCGGT
TGGAACACGC AGACCGAAGT CGATTTCCTG AAAAAGCTGA ACTACACCAA AGCGGAAGGT
GCGGCGGCAG GTCGTCCGAA GATTGAAACG GCGATCGATG CGGCAGAAGT GATTCTGTCT
CTGGCCCCGG AAACCAACGG TCAGGTAGCG GTGAAAGCAT GGGAAGCGCT GGGCAAATTC
ACCGGTCGTG ACCACACGCA TCTGGCACTG AATAAAGAAG ACGAGAAAAT TCGCTTCCGC
GATATTCAGG CGCAGCCGCG CAAGATTATC TCCAGCCCGA CCTGGTCTGG CCTCGAAGAC
GAACACGTTT CCTATAACGC CTGTTATACC AACGTTCATG AGCTGATTCC GTGGCGTACG
CTGTCCGGTC GCCAGCAACT GTATCAAGAC CATGAGTGGA TGCGCGCCTT CGGTGAAAGC
CTGCTGGTCT ACCGTCCGCC GGTCGATACC CGTGCGGCGG AGCCGGTGAT GAATAAGAAG
CCTAACGGTA ACCCGGAAAA AGCGCTGAAC TTCCTGACGC CGCACCAGAA ATGGGGCATT
CACTCCACGT ACAGCGACAA CCTGTTGATG CTGACGCTGG GACGTGGCGG CCCGATTATC
TGGCTGAGCG AAGAGGATGC CCGTGATTTG GGCATTGCGG ATAACGACTG GATAGAAGCG
TTTAACGCCA ACGGTGCGCT GACGGCACGT GCGGTAGTCA GCCAGCGTGT ACCTGCGGGT
ATGACGATGA TGTACCACGC GCAGGAACGC ATTATTAACC TGCCAGGTTC GGAAGTGACC
CAGCAGCGCG GCGGTATTCA CAACTCGGTA ACCCGTATCA CCCCGAAACC GACCCATATG
ATCGGTGGCT ATGCCCAACT GGCTTATGGC TTTAACTACT ACGGCACCGT TGGGTCAAAC
CGCGATGAAT TCGTCGTGGT TCGTAAAATG AAACGCATCG ACTGGCTGGA TGATGAAGGC
CAGGACTATG TTCAGCAACA AACGGTTCAG CAACAAACGG TTCAGCAACA AACAGTACAA
AAATCGGTAC AGCAGGAGAA AGCCTGA
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| Protein sequence | MSKFLDRLRY FKQLAEPFSD GHGQTLNTNR DWEDGYRSRW QHDKIVRSTH GVNCTGSCSW
KIYVKNGLVT WETQQTDYPR TRPDLPNHEP RGCPRGASYS WYLYSANRLK YPMMRKRLLK
LWREAKLTHS DPVDAWASIV NDPEKTKYYK QIRGRGGFVR SDWNEVNELI AASNVYTAKT
FGPDRIIGFS PIPAMSMVSY AAGARYLSLL GGVCLSFYDW YCDLPPASPM TWGEQTDVPE
SADWYNSSYI IAWGSNVPQT RTPDAHFFTE VRYKGTKTVA VTPDYAEIAK LCDQWLNPKQ
GTDSAMALAM GHVILKEFHL DKPSQYFSEY VRQYTDLPML VMLEPREDGY YAAGRMLRAS
DLVDNLGQDN NPQWKTIAID DESGNLTAPQ GSIGYRWGDQ GKWNLEQRDG LSGEEVKLRL
SLLGSHDDVV DVGFPYFGGA VSEHFNNVEL QEILLHKLPV KRLTLADGSE ALVACVYDLT
MANYGLDRGL GDDNCARDYD DVKAYSPAWA EEITGVSRQN IIRIAREFAD NADKTHGRSM
VIVGAGINHW YHMDMNYRGI INMLIFCGCV GQSGGGWAHY VGQEKLRPQT GWTPLAFGLD
WQRPPRHMNS TSFFYNHSSQ WRYETVAPQE LLSPLADKSR FSGSMIDFNV RAERMGWLPS
APQLNVNPLD IAEKARAAGV TPQDYTVAAL KSGEIKFAAE QPDSEQNYPR NLFIWRSNLL
GSSGKGHEYM LKYLLGTEHG IQGQDLGTAG SVKPEEVEWR DQGVEGKLDL VVTLDFRMSS
TCLYSDIVLP TATWYEKDDM NTSDMHPFIH PLSAAVDPAW DSKSDWEIYK GIAKAFSRVC
QGHLGQETDL VTLPIQHDSA AEMAQPFGVD DWKKGECDLI PGKTAPHLMV VERDYPNLYE
RFTSLGPLMD KLGNGGKGIG WNTQTEVDFL KKLNYTKAEG AAAGRPKIET AIDAAEVILS
LAPETNGQVA VKAWEALGKF TGRDHTHLAL NKEDEKIRFR DIQAQPRKII SSPTWSGLED
EHVSYNACYT NVHELIPWRT LSGRQQLYQD HEWMRAFGES LLVYRPPVDT RAAEPVMNKK
PNGNPEKALN FLTPHQKWGI HSTYSDNLLM LTLGRGGPII WLSEEDARDL GIADNDWIEA
FNANGALTAR AVVSQRVPAG MTMMYHAQER IINLPGSEVT QQRGGIHNSV TRITPKPTHM
IGGYAQLAYG FNYYGTVGSN RDEFVVVRKM KRIDWLDDEG QDYVQQQTVQ QQTVQQQTVQ
KSVQQEKA
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