Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PC1_2254 |
Symbol | |
ID | 8133198 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pectobacterium carotovorum subsp. carotovorum PC1 |
Kingdom | Bacteria |
Replicon accession | NC_012917 |
Strand | - |
Start bp | 2589433 |
End bp | 2589960 |
Gene Length | 528 bp |
Protein Length | 175 aa |
Translation table | 11 |
GC content | 57% |
IMG OID | 644865541 |
Product | transcriptional regulator, MarR family |
Protein accession | YP_003017828 |
Protein GI | 253688638 |
COG category | [K] Transcription |
COG ID | [COG1846] Transcriptional regulators |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 5 |
Plasmid unclonability p-value | 0.0799585 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAAAAATC AAACTCGCGA GCGCGAATAC GACGCGGTCG ATGCCATTCT TGAACAGTGG CGGCGCGAAC GGCCTGATCT GGATGCCAGC CCGATGGGAC CGATTGGACG TCTACGACGC TGTGCCGTGC TCATGGATCA GCGTCTGGAA TCCTGTTTTT CCCGATTCGA TCTGAGCAGT TGGGAATTTG ATATGTTGGC GACGCTGCGG CGTGCGGGCG CGCCGCATTG CCTGAGTCCG ACCGATCTGT TCTCCACGCT GATGGTGACG TCGGGTACCA TGACTCACCG CCTGAAGCGT CTTGAAACCC GTGGATTTAT CGAACGCGTG CAGAATGAAC AGGATGCGCG CAGTACGCTT GTGCAACTCA CTGGTACGGG GCTTGAACTG ATTAACCGTG CCGTTGAGGC ACACATTGAG AACGAGCGTC AGGTGCTCTC GGTACTGCCT GCCGATGTCC TGGCTGCGCT TGATGATAAC CTCGCGGCGC TACTGCGAGG GCTGGAAAAT CATAACAAAG GGAACTGA
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Protein sequence | MKNQTREREY DAVDAILEQW RRERPDLDAS PMGPIGRLRR CAVLMDQRLE SCFSRFDLSS WEFDMLATLR RAGAPHCLSP TDLFSTLMVT SGTMTHRLKR LETRGFIERV QNEQDARSTL VQLTGTGLEL INRAVEAHIE NERQVLSVLP ADVLAALDDN LAALLRGLEN HNKGN
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