Gene PC1_2254 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPC1_2254 
Symbol 
ID8133198 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePectobacterium carotovorum subsp. carotovorum PC1 
KingdomBacteria 
Replicon accessionNC_012917 
Strand
Start bp2589433 
End bp2589960 
Gene Length528 bp 
Protein Length175 aa 
Translation table11 
GC content57% 
IMG OID644865541 
Producttranscriptional regulator, MarR family 
Protein accessionYP_003017828 
Protein GI253688638 
COG category[K] Transcription 
COG ID[COG1846] Transcriptional regulators 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0799585 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAAAATC AAACTCGCGA GCGCGAATAC GACGCGGTCG ATGCCATTCT TGAACAGTGG 
CGGCGCGAAC GGCCTGATCT GGATGCCAGC CCGATGGGAC CGATTGGACG TCTACGACGC
TGTGCCGTGC TCATGGATCA GCGTCTGGAA TCCTGTTTTT CCCGATTCGA TCTGAGCAGT
TGGGAATTTG ATATGTTGGC GACGCTGCGG CGTGCGGGCG CGCCGCATTG CCTGAGTCCG
ACCGATCTGT TCTCCACGCT GATGGTGACG TCGGGTACCA TGACTCACCG CCTGAAGCGT
CTTGAAACCC GTGGATTTAT CGAACGCGTG CAGAATGAAC AGGATGCGCG CAGTACGCTT
GTGCAACTCA CTGGTACGGG GCTTGAACTG ATTAACCGTG CCGTTGAGGC ACACATTGAG
AACGAGCGTC AGGTGCTCTC GGTACTGCCT GCCGATGTCC TGGCTGCGCT TGATGATAAC
CTCGCGGCGC TACTGCGAGG GCTGGAAAAT CATAACAAAG GGAACTGA
 
Protein sequence
MKNQTREREY DAVDAILEQW RRERPDLDAS PMGPIGRLRR CAVLMDQRLE SCFSRFDLSS 
WEFDMLATLR RAGAPHCLSP TDLFSTLMVT SGTMTHRLKR LETRGFIERV QNEQDARSTL
VQLTGTGLEL INRAVEAHIE NERQVLSVLP ADVLAALDDN LAALLRGLEN HNKGN