Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PC1_2250 |
Symbol | |
ID | 8133194 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pectobacterium carotovorum subsp. carotovorum PC1 |
Kingdom | Bacteria |
Replicon accession | NC_012917 |
Strand | + |
Start bp | 2585785 |
End bp | 2586759 |
Gene Length | 975 bp |
Protein Length | 324 aa |
Translation table | 11 |
GC content | 55% |
IMG OID | 644865537 |
Product | serine/threonine dehydratase |
Protein accession | YP_003017824 |
Protein GI | 253688634 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG1171] Threonine dehydratase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 8 |
Plasmid unclonability p-value | 0.63083 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAGTGACT TACGCCTCCC CACTTTCGAC GATGTGGCAG CCGCAGCGGA ACGTATTGCT GGCTATGCCA ATAAAACGCC GGTGATGACA TCACGCACGG TCAATGACGT ATTCGGCGCA GAGGTTTTCT TCAAATGTGA AAACTTTCAG CGCATGGGCG CATTTAAGTT TCGCGGTGCC ATGAACGCGC TGTTGCAGTT CTCCGACGAG CAGAAAGCCG CTGGCGTCGT CACGTTTTCT TCCGGTAACC ATGCACAGGC CATTGCCCTT TCCGCCAAAT TACTTGGTAT TCCGGCAACG ATTGTCATGC CGCACGATGC ACCGGCAGCA AAAGTCGCCG CAACGCGTGG CTATGGCGGA AACGTGGTGG AATACAATCG CTATACCGAA GATCGTGAAC AGATTGGTAG AGATCTCGCC GAAAAGCATG GCCTGACGCT GATTCCCCCT TACGATCACC CGCACGTTAT TGCCGGACAA GGCACGGCGG CCAAAGAACT GTTGGAAGAA ACCGGTGAGC TGGATGCCCT GTTCGTCTGT CTGGGCGGAG GCGGGCTACT AGCAGGTTCG GCGCTTTCTG CCCGCCAGCT ATCACCGCAT TGTAAAATTT ATGGCGTCGA GCCTCTCGCG GGCAACGACG GACAGCAATC TTTCCGCAGC GGAAGCATCG TGCATATTGA TACGCCCAAC ACCATTGCCG ACGGCGCACA GACCCAGCAT CTGGGCAACC ATACCTTTCC TCTGATTCGC CAGAACGTCG ACGATATTCT GACCGTGACG GATGACGACC TGATTGACGC TATGCGGTTT TACGCTGAAC GCATGAAGAT TGTCGTGGAG CCAACGGGTT GCCTCAGCTT TGCGGCAGCA CGCAATCTCA GAGAATCGCT ACGCGGTAAA CGCATCGGCA TTATTATCAG CGGCGGGAAC GTCGATATCA GCCGCTACGG CGCTTTTCTG ACCGGCAATG CTTGA
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Protein sequence | MSDLRLPTFD DVAAAAERIA GYANKTPVMT SRTVNDVFGA EVFFKCENFQ RMGAFKFRGA MNALLQFSDE QKAAGVVTFS SGNHAQAIAL SAKLLGIPAT IVMPHDAPAA KVAATRGYGG NVVEYNRYTE DREQIGRDLA EKHGLTLIPP YDHPHVIAGQ GTAAKELLEE TGELDALFVC LGGGGLLAGS ALSARQLSPH CKIYGVEPLA GNDGQQSFRS GSIVHIDTPN TIADGAQTQH LGNHTFPLIR QNVDDILTVT DDDLIDAMRF YAERMKIVVE PTGCLSFAAA RNLRESLRGK RIGIIISGGN VDISRYGAFL TGNA
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