Gene PC1_2250 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPC1_2250 
Symbol 
ID8133194 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePectobacterium carotovorum subsp. carotovorum PC1 
KingdomBacteria 
Replicon accessionNC_012917 
Strand
Start bp2585785 
End bp2586759 
Gene Length975 bp 
Protein Length324 aa 
Translation table11 
GC content55% 
IMG OID644865537 
Productserine/threonine dehydratase 
Protein accessionYP_003017824 
Protein GI253688634 
COG category[E] Amino acid transport and metabolism 
COG ID[COG1171] Threonine dehydratase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.63083 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGTGACT TACGCCTCCC CACTTTCGAC GATGTGGCAG CCGCAGCGGA ACGTATTGCT 
GGCTATGCCA ATAAAACGCC GGTGATGACA TCACGCACGG TCAATGACGT ATTCGGCGCA
GAGGTTTTCT TCAAATGTGA AAACTTTCAG CGCATGGGCG CATTTAAGTT TCGCGGTGCC
ATGAACGCGC TGTTGCAGTT CTCCGACGAG CAGAAAGCCG CTGGCGTCGT CACGTTTTCT
TCCGGTAACC ATGCACAGGC CATTGCCCTT TCCGCCAAAT TACTTGGTAT TCCGGCAACG
ATTGTCATGC CGCACGATGC ACCGGCAGCA AAAGTCGCCG CAACGCGTGG CTATGGCGGA
AACGTGGTGG AATACAATCG CTATACCGAA GATCGTGAAC AGATTGGTAG AGATCTCGCC
GAAAAGCATG GCCTGACGCT GATTCCCCCT TACGATCACC CGCACGTTAT TGCCGGACAA
GGCACGGCGG CCAAAGAACT GTTGGAAGAA ACCGGTGAGC TGGATGCCCT GTTCGTCTGT
CTGGGCGGAG GCGGGCTACT AGCAGGTTCG GCGCTTTCTG CCCGCCAGCT ATCACCGCAT
TGTAAAATTT ATGGCGTCGA GCCTCTCGCG GGCAACGACG GACAGCAATC TTTCCGCAGC
GGAAGCATCG TGCATATTGA TACGCCCAAC ACCATTGCCG ACGGCGCACA GACCCAGCAT
CTGGGCAACC ATACCTTTCC TCTGATTCGC CAGAACGTCG ACGATATTCT GACCGTGACG
GATGACGACC TGATTGACGC TATGCGGTTT TACGCTGAAC GCATGAAGAT TGTCGTGGAG
CCAACGGGTT GCCTCAGCTT TGCGGCAGCA CGCAATCTCA GAGAATCGCT ACGCGGTAAA
CGCATCGGCA TTATTATCAG CGGCGGGAAC GTCGATATCA GCCGCTACGG CGCTTTTCTG
ACCGGCAATG CTTGA
 
Protein sequence
MSDLRLPTFD DVAAAAERIA GYANKTPVMT SRTVNDVFGA EVFFKCENFQ RMGAFKFRGA 
MNALLQFSDE QKAAGVVTFS SGNHAQAIAL SAKLLGIPAT IVMPHDAPAA KVAATRGYGG
NVVEYNRYTE DREQIGRDLA EKHGLTLIPP YDHPHVIAGQ GTAAKELLEE TGELDALFVC
LGGGGLLAGS ALSARQLSPH CKIYGVEPLA GNDGQQSFRS GSIVHIDTPN TIADGAQTQH
LGNHTFPLIR QNVDDILTVT DDDLIDAMRF YAERMKIVVE PTGCLSFAAA RNLRESLRGK
RIGIIISGGN VDISRYGAFL TGNA