| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PC1_2232 |
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| Symbol | |
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| ID | 8133176 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pectobacterium carotovorum subsp. carotovorum PC1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012917 |
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| Strand | - |
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| Start bp | 2563414 |
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| End bp | 2564886 |
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| Gene Length | 1473 bp |
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| Protein Length | 490 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 644865519 |
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| Product | succinic semialdehyde dehydrogenase |
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| Protein accession | YP_003017806 |
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| Protein GI | 253688616 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG1012] NAD-dependent aldehyde dehydrogenases |
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| TIGRFAM ID | [TIGR01780] succinate-semialdehyde dehydrogenase |
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Plasmid Coverage information |
| Num covering plasmid clones | 5 |
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| Plasmid unclonability p-value | 0.179886 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCAACAGA AAGCAACTAT ACCGCTAAAA CAGCAAGCAT TATTCCGCCA ACACTGCCTG
ATTGACGGCG AGTGGCAAGA CAGCCACAAC GGTGAACGTC TGGATGTCAC TAATCCGGCG
ACGGGCGAGG TGCTGGGTAG TGTACCGTTA GTGACGGTGT CACAAACTGA GCAGGCGATT
GCCGCAGCTG AACAGGCGCT GGTTGAGTGG CGTAAAAAGA CGGGGAAAGA ACGTGCCGCG
TTGTTGCAGG CGTGGGCGCG CCTGATTATG GATAATCAGG ACGATCTGGC TGCGCTGCTG
ACGGCGGAAC AGGGTAAACC GCTGGCGGAA GCTCGGGGGG AAATCGCCTA CGCCACCAGC
TTTATCGACT GGTTTGCGGA AGAAGCCAAA CGTATTGAAG GCAGCGTGCT GCAATCGCCA
CAAGGGCAAC AGCGCCTGCT GGTCATCAAG CAGCCCATTG GCGTGTGTGC GGCGATTACG
CCGTGGAATT TCCCGGCGGC GATGATCACC CGTAAGGTCG GGCCCGCGCT GGCGGCGGGC
TGCACGATGA TCGTTAAACC TGCTGAACAG ACGCCGTTTA CCGCGCTGGC GCTGGCTGAA
CTGGCGCAGC AGGCCGGTAT TCCGCGCGGC GTGTTGCAGG TCATCGTCGG TGACGCGCAG
TCGGTCGGCA AGGTGCTCTG CGATAGTCCG GTCGTGCGTA AACTGAGCTT CACCGGCTCC
ACGGAAGTCG GTCGCATCCT GATGGCGCAA AGCGCGCCAA CGGTGAAAAA GCTGTCGCTG
GAATTGGGAG GCAACGCGCC GTTTATCGTG TTCGATGATG CCGATGTGGA TCTGGCGGTG
AAAGGTATTC TGGCCTCCAA GTTCCGCAAC AGCGGGCAGA CCTGCGTCTG CGCCAACCGC
ATCTACGTGC AAGAGGGTAT TTATCCTGCG CTGGTCGAAC GACTGGTAGA GGAAGTGCGC
AAGTTGAAGG TCGGTGAAGG TACGCAGCCG GGTGTGACGC AGGGACCACT GATCGATGCC
GATGCGATTA GCAAGGTTGA GCAACATATT GCCGATGCGC TATCGCACGG AGCAACGCTG
CTGCTGGGGG GTAAACGCCA TGAGTTGGGT GGCACGTTCT TCACACCAAC CATCGTCGGC
GGGGTGACGC GCGACATGCG TTTTGCCCGT GAAGAGACAT TCGGACCTGT GGCACCGCTG
TTCCGTTTCA GCGATGAAGC GGAGGTGATT GCGATGGCGA ACGACACCGA GTTTGGGCTG
GCGGCCTATG TCTACACGCG TGATGCCGTG CGCCAGTGGA CGGTGCCGGA AGCTCTGGAC
TACGGCATGG TCGGCATCAA TACCGGCCTG ATTTCGAACG AAGTCGCGCC GTTTGGTGGC
GTGAAACAGT CTGGGCTGGG GCGTGAAGGG TCACGATTCG GTATCGAAGA CTATCTGGAA
ATGAAATACC TCTGCGTCGA TCTTTCCCGG TAA
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| Protein sequence | MQQKATIPLK QQALFRQHCL IDGEWQDSHN GERLDVTNPA TGEVLGSVPL VTVSQTEQAI
AAAEQALVEW RKKTGKERAA LLQAWARLIM DNQDDLAALL TAEQGKPLAE ARGEIAYATS
FIDWFAEEAK RIEGSVLQSP QGQQRLLVIK QPIGVCAAIT PWNFPAAMIT RKVGPALAAG
CTMIVKPAEQ TPFTALALAE LAQQAGIPRG VLQVIVGDAQ SVGKVLCDSP VVRKLSFTGS
TEVGRILMAQ SAPTVKKLSL ELGGNAPFIV FDDADVDLAV KGILASKFRN SGQTCVCANR
IYVQEGIYPA LVERLVEEVR KLKVGEGTQP GVTQGPLIDA DAISKVEQHI ADALSHGATL
LLGGKRHELG GTFFTPTIVG GVTRDMRFAR EETFGPVAPL FRFSDEAEVI AMANDTEFGL
AAYVYTRDAV RQWTVPEALD YGMVGINTGL ISNEVAPFGG VKQSGLGREG SRFGIEDYLE
MKYLCVDLSR
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