| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PC1_2229 |
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| Symbol | |
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| ID | 8133173 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pectobacterium carotovorum subsp. carotovorum PC1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012917 |
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| Strand | - |
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| Start bp | 2560650 |
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| End bp | 2561918 |
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| Gene Length | 1269 bp |
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| Protein Length | 422 aa |
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| Translation table | 11 |
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| GC content | 56% |
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| IMG OID | 644865517 |
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| Product | binding-protein-dependent transport systems inner membrane component |
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| Protein accession | YP_003017804 |
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| Protein GI | 253688614 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG1176] ABC-type spermidine/putrescine transport system, permease component I |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.838973 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTCCCAGA GTGATATCGC CGCCGCTGTG CCGTCTGGCG GAAGTGAGGA AAACTCGACC
TTGAAACAAC AACTGTGGCT GGCGCAGAAA GCCTATAAAA AACGCTCTCT GCTGCTGATT
GCACCGCTGT TTCTGTTTAT CGTGGTGAGT TTTCTCTTCC CGATCACCTC GATTTTGGGG
AAAAGCGTCT CCAATCCGGA ATTGCGCGAC AATATGCCAC AGACCATTGC CGCGATGCGG
CAATGGTCGG GCAACGATGT GCCGGATGAA ACCGTCTTTC GGGCGCTGGT CGGCGATCTG
CGTGATGCCC GCAGCAGCGG TAAGTTAAGC ACGATTACCA AACGGCTAGG GTATGAAGGC
GCGGAATACC GCACGCTGAT TACCCGCACA TTGCGCAAGC TGCCCGCAGA GGGCAGCAGC
GACGTGCGCG ATCAACTGAT CCATGAGCAG CCGATGTGGG GAGAATTAGC AACCTGGAAA
ACGTTCGATC GCGCAGCGCG TCCTTTTACC AGCTATTACC TGTTGGCGGT GTTTGACCAT
AAAGTTGATG CCACCACGCA GCAAATCGTC CCACAGCCAG CCGATCAGGC GCTGTATGTG
GACGTGCTGC TGCGCACGCT GCTGATGGCG GGCGTGGTAA CACTGCTGTG CGTGGGGCTC
GGATACCCGC TGGCGTACTG GCTGGCGAAG CAGCCTTCTA ACCGCGCCAA TCTGTTGCTA
ATTTTGGTGC TGCTGCCGTT CTGGACATCA CTGATCGTTC GCACCGCGAG TTGGATTGTG
CTGTTGCAGT CCGGTGGATT AATCAACCGT TCGCTGATGA ATATCGGCAT TATCGATGAA
CCGCTGGTGC TGGTATTTAA CCGTATCGGT GTCTACATCT CGATGACCCA CATCCTATTA
CCGTTCTTTA TTCTACCGCT GTACGCGGTG ATGAAAGGCA TTTCCCCGAA CTATGTGCGT
GCGGCGGTCT CGCTGGGTGC GCATCCGTTT ATCGCCTTCT GGCGGGTTTA TGTGCCGCAA
ACCTACGCCG GTGTGACGGC AGGAGCGCTG CTGGTCTTTA TGATGGCGAT TGGCTACTAC
ATTACGCCAG CGCTGCTGGG CGGACCGAGC GACCAGATGT TGAGCTATTT TGTCGCGTTC
TTTACTAACA CCACCATGAA CTGGGGAATG GCGGCCGCGT TAGGGACACA ACTGCTGATT
ATCGTGACGC TACTGTACGT GGTGTACATC CGGGTAACGC GAACCAATGC GGAAGCCGCG
GCGCACTAG
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| Protein sequence | MSQSDIAAAV PSGGSEENST LKQQLWLAQK AYKKRSLLLI APLFLFIVVS FLFPITSILG
KSVSNPELRD NMPQTIAAMR QWSGNDVPDE TVFRALVGDL RDARSSGKLS TITKRLGYEG
AEYRTLITRT LRKLPAEGSS DVRDQLIHEQ PMWGELATWK TFDRAARPFT SYYLLAVFDH
KVDATTQQIV PQPADQALYV DVLLRTLLMA GVVTLLCVGL GYPLAYWLAK QPSNRANLLL
ILVLLPFWTS LIVRTASWIV LLQSGGLINR SLMNIGIIDE PLVLVFNRIG VYISMTHILL
PFFILPLYAV MKGISPNYVR AAVSLGAHPF IAFWRVYVPQ TYAGVTAGAL LVFMMAIGYY
ITPALLGGPS DQMLSYFVAF FTNTTMNWGM AAALGTQLLI IVTLLYVVYI RVTRTNAEAA
AH
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