| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PC1_2226 |
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| Symbol | |
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| ID | 8133170 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pectobacterium carotovorum subsp. carotovorum PC1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012917 |
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| Strand | - |
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| Start bp | 2558638 |
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| End bp | 2559372 |
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| Gene Length | 735 bp |
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| Protein Length | 244 aa |
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| Translation table | 11 |
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| GC content | 56% |
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| IMG OID | 644865514 |
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| Product | short-chain dehydrogenase/reductase SDR |
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| Protein accession | YP_003017801 |
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| Protein GI | 253688611 |
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| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism
[R] General function prediction only |
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| COG ID | [COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACAGCAC AAAAAACACT CTTGCTGACC GGTGCCAGCC GGGGAATCGG GCATGCCACC
GTTAAGCATT TCCACGCGGC GGGGTGGCGG ATCTTTACCG CGTCGCGTCA GAACTGGGCG
GAAGAGTGCC CGTGGGCGGA AAAGTTGCTT AACCACATTC ATCTCGATTT GGAAGATATC
GACAGCCTGC AACAGACGCT GCCGCTGATT AAGGAAAAAC TGGGCGGACG GTTGGATGCG
TTGGTCGATA ACGCAGGGAT TTCGCCAAAG GGGGAAGGCG GGCAGCGTTT GGGCGTGCGC
GATACAGACT ATGCGACCTG GCTGCGGGTC TTCAACGTCA ATCTGTTTTC CTGCGCACTG
TTGGCAAACG GCCTGTTTGA CGAGCTAAAA GCATCACAGG GCTGTGTGAT TAATGTGACC
TCAATTGCCG GATCGCGCGT TCATCCTTTT GCTGGTGTTG CCTATGCCAC CTCAAAAGCG
GCGCTGTCTG CGCTGACGCG GGAAATGGCG TTTGATTTTG GTCAGCATGG CGTTCGCGTG
AATGCGATTG CGCCGGGGGA AATAGAAACC TCGATTCTGT CACCCGGCAC GGATGACATC
ATTGAACGGC AGGTGCCAAT GCAACGCTTA GGTAAACCCG AAGAGGTGGC AAGCCTGATC
TATTTTCTCT GCACCTCCGG TGCGTCTTAT GTCAACGGCG CGGAAATCCA CGTTAACGGA
GGGCAGCATG TCTGA
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| Protein sequence | MTAQKTLLLT GASRGIGHAT VKHFHAAGWR IFTASRQNWA EECPWAEKLL NHIHLDLEDI
DSLQQTLPLI KEKLGGRLDA LVDNAGISPK GEGGQRLGVR DTDYATWLRV FNVNLFSCAL
LANGLFDELK ASQGCVINVT SIAGSRVHPF AGVAYATSKA ALSALTREMA FDFGQHGVRV
NAIAPGEIET SILSPGTDDI IERQVPMQRL GKPEEVASLI YFLCTSGASY VNGAEIHVNG
GQHV
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