| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PC1_2224 |
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| Symbol | |
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| ID | 8133168 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pectobacterium carotovorum subsp. carotovorum PC1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012917 |
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| Strand | - |
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| Start bp | 2556220 |
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| End bp | 2557524 |
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| Gene Length | 1305 bp |
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| Protein Length | 434 aa |
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| Translation table | 11 |
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| GC content | 58% |
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| IMG OID | 644865512 |
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| Product | aminotransferase class-III |
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| Protein accession | YP_003017799 |
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| Protein GI | 253688609 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0160] 4-aminobutyrate aminotransferase and related aminotransferases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGTCAGA GAGATATCAC GCCTGAAATG ACAACGACAG AAGCGTTGCT GGCACGTCGT
CAGCGGGTAT TGGGCAGCGG TTACCGCCTG TTTTATGAAG AACCGCTGCA TGTTGTGCGC
GGCGAGGGTG TGTGGCTGTT CGATCATCAG GGGAAACGTT ATCTGGATGT CTATAACAAT
GTGGCCTCGG TCGGGCATTG TCATCCGGCG GTGGTGGAGG CGATGGCGCG GCAAAGCGCT
CTGCTCAACA CCCACACGCG GTATTTGCAC TCAGCCATTG TCGATTTTGC GGAAGATTTA
CTCAGCGAAT TTCCCGCCGA ACTAAATAAC GTGATGTTGA CCTGTACCGG CAGTGAGGCC
AACGATCTGG CGTTGCGCAT TGCCCGCCAC ACCACGGGGG GAACGGGCAT CCTGGTGACG
CGCTGGGCGT ACCACGGCGT GACCAGTGCG CTGGCGGAGC TGTCGCCGTC GTTGGGGGAT
GGCGTGGCGC GCGGTAGTCA TGTGAAGCTG ATTGACGCAC CAGATTCCTA TCGTCAGCCC
GGCGCATTTC TTACCAGTAT TCGTGAGGCG CTGACACAGA TGCAGCAGGA AGGCATTCGT
CCTGCCGCGC TGCTGGTGGA TACCATTTTT TCCAGCGACG GCGTGTTCTG TGCGCCGGAA
GGCGAAATGG CACAGGCGGC GGCGCTGATT CGCCAGGCGG GCGGATTGTT TATCGCGGAT
GAAGTGCAGC CGGGCTTTGG TCGCACCGGG GAGTCAATGT GGGGCTTTGC GCGTCACGGT
GTCGTTCCGG ATTTGGTGAG TTTAGGGAAG CCGATGGGCA ACGGGCATCC TATCGCCGGG
CTGGTTGGAC GTTCCGCATT GTTCGAGGCA TTCGGGCGAG AAGTGCGTTA TTTCAATACG
TTCGGAGGCA ATCCGGTTTC CTGTCAGGCG GCGCACGCGG TACTGAGAGT GATTCGGGAA
GAGCAGTTGC AACAGAACGC CCAGCGCGTG GGGCATTATC TGCGGCAAGG GTTACAGCAA
TTGGCACAGG ATTTTCCACT GATCGGCGAT ATTCGGGCTT ACGGCCTGTT TATCGGTGTA
GAGCTAGTCA ACGATCGTGA AAGCAAAACG CCAGCAAGTG AATCTGCATT GCAGGTGGTG
AATGCGATGC GCCAGCGCGG CGTGTTGATC AGCGCGACAG GGCCCGCGGC GAACGTGCTG
AAAATTCGCC CGCCGCTGGT GTTTCAGGAA GAACATGCCG ATGTGTTTTT AACCACGTTG
AGCGATGTCT TAACGCTAAC CGACAGCACC CGCGCGCCGA GATAA
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| Protein sequence | MSQRDITPEM TTTEALLARR QRVLGSGYRL FYEEPLHVVR GEGVWLFDHQ GKRYLDVYNN
VASVGHCHPA VVEAMARQSA LLNTHTRYLH SAIVDFAEDL LSEFPAELNN VMLTCTGSEA
NDLALRIARH TTGGTGILVT RWAYHGVTSA LAELSPSLGD GVARGSHVKL IDAPDSYRQP
GAFLTSIREA LTQMQQEGIR PAALLVDTIF SSDGVFCAPE GEMAQAAALI RQAGGLFIAD
EVQPGFGRTG ESMWGFARHG VVPDLVSLGK PMGNGHPIAG LVGRSALFEA FGREVRYFNT
FGGNPVSCQA AHAVLRVIRE EQLQQNAQRV GHYLRQGLQQ LAQDFPLIGD IRAYGLFIGV
ELVNDRESKT PASESALQVV NAMRQRGVLI SATGPAANVL KIRPPLVFQE EHADVFLTTL
SDVLTLTDST RAPR
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