| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PC1_2221 |
|---|
| Symbol | |
|---|
| ID | 8133165 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pectobacterium carotovorum subsp. carotovorum PC1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_012917 |
|---|
| Strand | - |
|---|
| Start bp | 2551301 |
|---|
| End bp | 2552323 |
|---|
| Gene Length | 1023 bp |
|---|
| Protein Length | 340 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 51% |
|---|
| IMG OID | 644865509 |
|---|
| Product | ABC transporter related |
|---|
| Protein accession | YP_003017796 |
|---|
| Protein GI | 253688606 |
|---|
| COG category | [P] Inorganic ion transport and metabolism |
|---|
| COG ID | [COG1135] ABC-type metal ion transport system, ATPase component |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 12 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGATTCGGT TAGAAAACGT GAGCGTTGAT TTTCCCGCCG GCAAAGCAGC ACAGTCCAGA
GCGGTAAACA ACGTCAACCT GACCATTCAA CAGGGTGAAG TTTTTGGGAT TGTTGGCACC
AGCGGCGCGG GGAAAAGTAC GCTGCTGCGG ACAATCAATT TATTGCAGCG TCCAACTGAA
GGACGCGTGT TTCTGGGCGA TACGCTGATT AGCGATGCGT CTGGCCGCGA ACTGCGTCAG
CATCGGCAGC GTATCGGGAT GATATTCCAG CATTTTAATC TGATGCACAC CCGTAACGTG
TATGACAACG TGGCGTTTAG CCTGCGGGCC GCGGGGAAGA GCAAAGAAGA GATTGCCTCA
CGCGTGCCGG AAATTCTGTC GCTGGTTGGG TTGCAGGACA AAGGGACATC TTATCCGGCG
CAACTGAGCG GTGGGCAGAA GCAGCGTGTT GGCATCGCCC GCGCGATTGC TAACCATCCC
GAAGTGCTGC TGTGCGATGA ACCCACCTCG GCACTGGATC TGGAAACGTC AGCCTCTATT
CTGGCGTTAT TGAAAAGTAT CAATATTCGG TTAGGCATCA CGATCGTGCT GATTTCCCAT
GAAATGAGCG TGATTAAAAG CATTTGTCAG CGTATGGCGG TGATGACGGG CGGCAATATT
GTGGAAGAGG GCGACGTCTT TACGATCTTC TCTTCGCCTC AGCATGCCTA CACCAAACAG
CTGGTTAGCC ATACCAGTCC GGTCGAATTA CCTGAACGCT TTAAGCAGAA TAATAAAGGC
GTCTTGCTGA AAATACTCTT CGCCGATGAT TCGGTAGAAC AACCGATATT ATCTGACGTG
GCACAGCAGT TTCAGGTATC GGTAAATATT CTGCACGGCA ATATTGAATA CATTAACGAT
CGCGCGCTGG GGCATATTAT CGCCCAGATT TCATACCGTG ACGATCCGAC GGCGGATAAC
CTCGCCGCCG CTATTGCTTA TATTCGACAG AATACCTTTG GGGTGGAGGT CATCAATGGC
TGA
|
|---|
| Protein sequence | MIRLENVSVD FPAGKAAQSR AVNNVNLTIQ QGEVFGIVGT SGAGKSTLLR TINLLQRPTE
GRVFLGDTLI SDASGRELRQ HRQRIGMIFQ HFNLMHTRNV YDNVAFSLRA AGKSKEEIAS
RVPEILSLVG LQDKGTSYPA QLSGGQKQRV GIARAIANHP EVLLCDEPTS ALDLETSASI
LALLKSINIR LGITIVLISH EMSVIKSICQ RMAVMTGGNI VEEGDVFTIF SSPQHAYTKQ
LVSHTSPVEL PERFKQNNKG VLLKILFADD SVEQPILSDV AQQFQVSVNI LHGNIEYIND
RALGHIIAQI SYRDDPTADN LAAAIAYIRQ NTFGVEVING
|
|---|
| |