| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PC1_2214 |
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| Symbol | |
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| ID | 8133158 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pectobacterium carotovorum subsp. carotovorum PC1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012917 |
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| Strand | + |
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| Start bp | 2543498 |
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| End bp | 2544298 |
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| Gene Length | 801 bp |
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| Protein Length | 266 aa |
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| Translation table | 11 |
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| GC content | 57% |
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| IMG OID | 644865502 |
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| Product | type III secretion protein SpaR/YscT/HrcT |
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| Protein accession | YP_003017789 |
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| Protein GI | 253688599 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG4791] Type III secretory pathway, component EscT |
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| TIGRFAM ID | [TIGR01401] type III secretion protein SpaR/YscT/HrcT |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGATCGCCA CCATTCAGCA CGTTTACGAC TTTATCATCG CCATAACGCT CGGTATCGCC
CGGCTGTATC CCTGCTTTAT TCTGGTGCCG GTTCTTTCAC TCAACGTGCT GAAAGGCATG
ATGCGCAACG CGGTGGTGAT TTCCCTGACG CTGCTGCCTG CTCCCATCGT ACAACAGCAA
CTCCTGCTGA CGCCGCTTTC CTGGCCGATG CTGCCCGGCC TGCTGTTGAA AGAGATTATT
GTCGGGCTGC TCATCGCATT GATTCTGGCG ATGCCGTTCT GGCTGTTTGA ATCCGTCGGC
GCCCTGTTCG ATAACCAGCG CGGCGCGTTG ATGGGCGGTC AGCTCAACCC TGCGCTGGGC
TCGGACGCCA CGCCGCTCGG CCATCTACTG AAACAGACCC TGATTCTTCT GCTGATTATT
GGTATCGGCC TGAAGGGACT AACGCAGCTG ATATGGGATA GCTACCAGAT CTGGCCGGTA
CTGTCCTGGC TGCCCGCGCC GGGCGAACAA GGGTTTGAGG TCTACCTCGA CCTGCTGGCC
GATACCTTCA CCCATCTGGT GGTGTACGCC GGGCCACTGG TGGCGCTACT GCTGCTGTTG
GAATTCAGTA TTGCGCTACT CAGTCTGTAT AGCCCACAGC TTCAAGTCTT CGTCCTCTCC
ATTCCGGCTA AGTGTCTGGT CGGGATGGCG TTTTTCATCG TCTACCTGCC GGTGCTGCAG
TATCTGGGCG GCGACAGACT GAAGGGACTA CCGGATCTTA AGCACCTGCT CCCACTACTT
TTTACGGCAT CGAATAGCTA A
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| Protein sequence | MIATIQHVYD FIIAITLGIA RLYPCFILVP VLSLNVLKGM MRNAVVISLT LLPAPIVQQQ
LLLTPLSWPM LPGLLLKEII VGLLIALILA MPFWLFESVG ALFDNQRGAL MGGQLNPALG
SDATPLGHLL KQTLILLLII GIGLKGLTQL IWDSYQIWPV LSWLPAPGEQ GFEVYLDLLA
DTFTHLVVYA GPLVALLLLL EFSIALLSLY SPQLQVFVLS IPAKCLVGMA FFIVYLPVLQ
YLGGDRLKGL PDLKHLLPLL FTASNS
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