| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PC1_2208 |
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| Symbol | |
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| ID | 8133152 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pectobacterium carotovorum subsp. carotovorum PC1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012917 |
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| Strand | + |
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| Start bp | 2539080 |
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| End bp | 2540447 |
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| Gene Length | 1368 bp |
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| Protein Length | 455 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 644865496 |
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| Product | type III secretion apparatus H+-transporting two-sector ATPase |
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| Protein accession | YP_003017783 |
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| Protein GI | 253688593 |
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| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG1157] Flagellar biosynthesis/type III secretory pathway ATPase |
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| TIGRFAM ID | [TIGR01026] ATPase FliI/YscN family
[TIGR02546] type III secretion apparatus H+-transporting two-sector ATPase |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCAGACAC AACCTTCTTC TTTCCCCCTG CTCGATCAGT GGGTCGCACG GCAGCGCCAG
CATTTGGCAG GCTTTGCGCC CGTGGAGAAA AAAGGCCGCG TCATGGCCGT CAGCGGCATC
TTGCTGGAGT GCAGTCTGCC GCAGGCGCGC ATTGGCGACC TGTGCTGGGT GGCACGCCAG
GACGACAGCC AGATGATGGC CGAAGTCGTA GGGTTTAGCC CAGACAATAC CTTTCTCTCC
GCGCTCGGGG CGCTGGACGG CATCGCTCAG GGTGCCACCG TGACGCCGCT GTATCAGCCG
CACTGCATTC AGGTGTCGGA ACGTTTGCTG GGCAGCGTGC TGGACGGGTT TGGGCGGGCG
CTGGAGGACG ATGGTGAGAG CGCGTTTGTC GAACCCGGTC ATGCTACAGG TCGCACGCAG
CCGGTGCTGG GCGATGCCCC GCCGCCGACC TCCCGACCGC GCATCAGCCA GCCGCTCCCC
ACAGGATTGC GCGCCGTCGA TGGCTTGCTA ACCATCGGTC AGGGGCAACG CGTCGGCATC
TTCGCCGGCG CGGGCTGCGG CAAAACCACG CTACTGGCCG AACTGGCACG TAATACGCCG
TGCGACGCCA TTGTTTTCGG GCTGATTGGC GAACGTGGCC GCGAACTGCG CGAGTTTCTC
GATCATGAAC TGGACGATGA ACTGCGCAGT CGCACCGTGC TGGTGTGTTC CACCTCCGAC
CGCAGCAGCA TGGAACGCGC GCGCGCGGCG TTCACTGCCA CGGCTATCGC CGAGGCTTAC
CGCGCCGAAG GCCGTCAGGT ACTGCTGATT ATTGATTCCC TGACGCGTTT CGCTCGTGCC
CAGCGCGAAA TCGGTCTGGC GCTCGGAGAG CCGCAGGGGC GCGGCGGACT GCCGCCGTCG
GTCTATACGC TACTGCCGCG GTTGGTTGAA CGCGCTGGAC AAACGGAAGA CGGCGCCATC
ACCGCGCTCT ATTCCGTGCT GATTGAACAG GATTCCATGA ACGATCCGGT CGCCGACGAA
GTCCGTTCAT TGATTGACGG ACACATCGTG CTCGCCCGAC GCCTGGCGGA ACAGGGGCAT
TATCCGGCTA TCGACGTACT GGCCAGCCTG AGCCGCACCA TGAGTAACGT CGTAGATACC
GATCACACCC GCAACGCGGG CGGCGTACGG CGTCTGATGG CGGCGTACAA ACAGGTTGAG
ATGCTAATTC GCCTCGGCGA ATACCAGCCC GGCCATGATG TGCTGACCGA TTCCGCCGTC
AACGCCCATG CAGAAATCAC GCAGTTTCTT CGTCAGTCAA TGCGTGAACC GATGCCTTAT
GGCGTGATTC AGCAACAGCT CGCCGGAGTC AGCCGCTATG CCCCATAA
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| Protein sequence | MQTQPSSFPL LDQWVARQRQ HLAGFAPVEK KGRVMAVSGI LLECSLPQAR IGDLCWVARQ
DDSQMMAEVV GFSPDNTFLS ALGALDGIAQ GATVTPLYQP HCIQVSERLL GSVLDGFGRA
LEDDGESAFV EPGHATGRTQ PVLGDAPPPT SRPRISQPLP TGLRAVDGLL TIGQGQRVGI
FAGAGCGKTT LLAELARNTP CDAIVFGLIG ERGRELREFL DHELDDELRS RTVLVCSTSD
RSSMERARAA FTATAIAEAY RAEGRQVLLI IDSLTRFARA QREIGLALGE PQGRGGLPPS
VYTLLPRLVE RAGQTEDGAI TALYSVLIEQ DSMNDPVADE VRSLIDGHIV LARRLAEQGH
YPAIDVLASL SRTMSNVVDT DHTRNAGGVR RLMAAYKQVE MLIRLGEYQP GHDVLTDSAV
NAHAEITQFL RQSMREPMPY GVIQQQLAGV SRYAP
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