Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PC1_2204 |
Symbol | |
ID | 8133148 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pectobacterium carotovorum subsp. carotovorum PC1 |
Kingdom | Bacteria |
Replicon accession | NC_012917 |
Strand | - |
Start bp | 2533961 |
End bp | 2534506 |
Gene Length | 546 bp |
Protein Length | 181 aa |
Translation table | 11 |
GC content | 54% |
IMG OID | 644865492 |
Product | RNA polymerase, sigma-24 subunit, ECF subfamily |
Protein accession | YP_003017779 |
Protein GI | 253688589 |
COG category | [K] Transcription |
COG ID | [COG1595] DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog |
TIGRFAM ID | [TIGR02937] RNA polymerase sigma factor, sigma-70 family |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGGATATGT CTACCCTGAA ACACATCGAA CCGACCCCTT CGCTTTACCC GGCGCTCGCT GTCGATTGGG AACAGGTGTT TCGTCAACAC GGAAAGAAAT TGCATAACTT CATCCGCAAG CGCGTCAGCA ACCATGACGA CGTTGAGGAT TTACAGCAAA TGACCTACCT GGAAGTGCTC AAACATCAGG ATAAATTTGC GGGAGCATCG CGGCCGGAGA CGTGGGTATT TGGTATTGCC CTCAATCTGG TTCGCAACTA TTTCAAGCAG GCACGGCAGC GCGCTCAGGA AATGGGTGAT GAGATGCTGG AGCATATTGC GATAGATCTC GATCCCGGCG CGATCGCTGA AAGCCAGCGG GCATTGAAAC GCGCAATGGA TGCCATCGTC TCACTGCCTG AGGATACCCG TCAGATGCTG ATGCAGTTGC TGGATACCGA TGCCAGTTAT CAGGATCTTG CGTTGCAGTT GGAGATCCCC ATCGGTACGG TGCGGTCACG GCTGTCTCGT GCCCGAGGGG TGATCCGTCA GGCCGTTGAG TCCTGA
|
Protein sequence | MDMSTLKHIE PTPSLYPALA VDWEQVFRQH GKKLHNFIRK RVSNHDDVED LQQMTYLEVL KHQDKFAGAS RPETWVFGIA LNLVRNYFKQ ARQRAQEMGD EMLEHIAIDL DPGAIAESQR ALKRAMDAIV SLPEDTRQML MQLLDTDASY QDLALQLEIP IGTVRSRLSR ARGVIRQAVE S
|
| |