| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PC1_2203 |
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| Symbol | |
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| ID | 8133147 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pectobacterium carotovorum subsp. carotovorum PC1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012917 |
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| Strand | - |
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| Start bp | 2532249 |
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| End bp | 2533829 |
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| Gene Length | 1581 bp |
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| Protein Length | 526 aa |
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| Translation table | 11 |
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| GC content | 53% |
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| IMG OID | 644865491 |
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| Product | PAS/PAC sensor signal transduction histidine kinase |
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| Protein accession | YP_003017778 |
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| Protein GI | 253688588 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG4585] Signal transduction histidine kinase |
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| TIGRFAM ID | [TIGR00229] PAS domain S-box |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCCGTTGC AGGGTTTCCT GTCCATCTTC TGGAATGTTG AGACGCCGTA TCGCGCTACC
TGCACGGCGG GTGGCTGCAC AAGTGTCTTA ATTCAAAATA AGGAGATGGC AATGATGTTC
ACCCAACCGT TTCGTTCCGA TGAAAAAACC AAGGCTCCCG AGCTGGAACT GGTGGATTTT
GCATTTGGTC GCATCAAGGA CGCGATTTAT ATCGTCAATG AAGATCAGCG TTTTTGTTAT
GTCAATGAAG CCGCCAGCCA GACACTGGGT TACAGCATTA CGGAATTCAT GCATCTGAGC
GTTGTCGACA TCGACCCGCT ATGGAGCGCC GATCATCGGT CACCGGACTG GCTGCAGGAG
TACGAATCAG GCGTGGGTAC CACGTTTGAA ACCCAGCACC TCACCCGCTA CGGCATGACT
ATTCCGGTAG AAGTTAATCT CACACATTTC CAACACAGAG GACGTAGCTA CAGCATGTGT
GTCGTCAGAG ATATCAGGGA ACGTAAACAT ATTGAACAGT TAGCCTATGC GCGAGAGCAG
GAATTTCGCG CGCTGGTTGA GAACACGCCG GATTTGATTA TTCGCTTCGA TCCCAACCTG
AATTGCCTGT ACGCCAACGC GGCCAGTTTG AAACATCTGG ATTTCACCGT AGAGCAACTT
CGGGGCCGTA TGATTACGGA GTTAATGCCC GGTGTTGGGT GTGCAATCCG TATGGAACAA
CTGGTGCAGC AGGTGGTTGA TACCCGCAGC AGCGCGGAAG GTGAAGTGAT GGAGTCGCGG
GGGAAAGGCG ATCAGCGCCA TCAAAGTATT CACCATATTC GCTGTGTGCC GGAGTTTGAT
CAGCATGGCG CGCTGGTGTC GATTCTAACC GTAGGACGGG ACATTACCGC GATTCGCTAT
GCGGAGAAAA AACTGGCTGA TTCGCATATG CAACTGCGTT TGCTGGCACG CCAGCGCGAG
ATTTCGCGTG AGGAAGAACG TAAGCATATC GCGCAGGAAA TTCACGATGA GCTGGGGCAG
CATTTGACCA CGATCCGCAT GAGCCTGTCG CTGATGCGCA TGTGTTTTGC CAAGGAAAAC
CCTGACATGC AGGCGCATTT GCAAAAGCTG ATGCAGTTGG CTGACCAAAC GATTCAGGTG
GTGCGTAACG TGTCGACCCG GCTTAGACCG AATGTGTTGA ATATGGGGCT TACACCTGCG
CTGGAATGGC TGTGCGACGA ATTTAACCGG CACTACAGCG CCACCTGTCT GCTACGAACC
TTGGGGGAAC CGCTGGCGCT CAATGACGAA AGCACCACGG CGGCATTCCG CGTCGTGCAG
GAATCGTTGA CTAACGTCGC GCGCTACGCC GCCGCTACCC AGGTACGCAT TACGCTGGAT
CATCAGCCTG ACTGTGTGGT GCTGTGCATC AAAGACAACG GCAAAGGTTT TGATTCCCAA
GCTAAAAATA AAAACGCTTT CGGGCTCATG AGTATGAAAG AGCGAGGGCG GATGCTGGGG
GGCGAAGTCG TGATTGAAAG TGAGCCCGGT AAAGGCACGC TGGTGCAGTT AACGTTTCCT
AAAAATGGTG ATACCCGTTA A
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| Protein sequence | MPLQGFLSIF WNVETPYRAT CTAGGCTSVL IQNKEMAMMF TQPFRSDEKT KAPELELVDF
AFGRIKDAIY IVNEDQRFCY VNEAASQTLG YSITEFMHLS VVDIDPLWSA DHRSPDWLQE
YESGVGTTFE TQHLTRYGMT IPVEVNLTHF QHRGRSYSMC VVRDIRERKH IEQLAYAREQ
EFRALVENTP DLIIRFDPNL NCLYANAASL KHLDFTVEQL RGRMITELMP GVGCAIRMEQ
LVQQVVDTRS SAEGEVMESR GKGDQRHQSI HHIRCVPEFD QHGALVSILT VGRDITAIRY
AEKKLADSHM QLRLLARQRE ISREEERKHI AQEIHDELGQ HLTTIRMSLS LMRMCFAKEN
PDMQAHLQKL MQLADQTIQV VRNVSTRLRP NVLNMGLTPA LEWLCDEFNR HYSATCLLRT
LGEPLALNDE STTAAFRVVQ ESLTNVARYA AATQVRITLD HQPDCVVLCI KDNGKGFDSQ
AKNKNAFGLM SMKERGRMLG GEVVIESEPG KGTLVQLTFP KNGDTR
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