| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PC1_2161 |
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| Symbol | |
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| ID | 8133105 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pectobacterium carotovorum subsp. carotovorum PC1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012917 |
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| Strand | - |
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| Start bp | 2468878 |
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| End bp | 2470146 |
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| Gene Length | 1269 bp |
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| Protein Length | 422 aa |
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| Translation table | 11 |
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| GC content | 54% |
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| IMG OID | 644865449 |
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| Product | urea ABC transporter, urea binding protein |
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| Protein accession | YP_003017736 |
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| Protein GI | 253688546 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0683] ABC-type branched-chain amino acid transport systems, periplasmic component |
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| TIGRFAM ID | [TIGR03407] urea ABC transporter, urea binding protein |
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 0.269161 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAAAGAC GTTCATTGCT AAAAGTTTTT GCGCTTTCTG CGACAGTGGT TGGCATGGGG
TTGACCTGGA GCGTGCAGGC GGCAGACACC ATCAAAGTCG GCATTATGCA TTCGCTGTCC
GGCACGATGG CGATTTCAGA AACGCCGCTG AAGGATGTGG CGCTGATGAC CATTGATGAA
ATCAATGCCA AAGGCGGCGT GTTGGGTAAA AAACTGGAAC CGGTGGTGGT CGACCCCGCT
TCGAACTGGC CGCTGTTTGC CGAGAAAGCA CGCCAATTGC TGACGCAGGA TAAGGCGGCG
GTGGTGTTCG GCTGCTGGAC ATCGGTATCG CGTAAATCGG TCCTGCCAGT ATTTGAGGAA
CTGAACGGGT TGCTGTTCTA CCCGGTGCAG TATGAAGGCG AAGAAATGTC GCCAAATGTG
TTCTACACCG GCGCAGCACC GAATCAGCAG GCGATCCCTG CGGTGGAATA CCTGATGAGC
GAAGACGGCG GGGCGGCGAA GCGCTTCTTC CTGCTGGGCA CGGACTATGT GTATCCGCGT
ACCACCAATA AGATTTTGCG CGCCTTCCTG CATTCCAAAG GCGTTCAGGA CAAAGATATT
GAGGAAGTCT ATACACCGTT TGGTCACAGC GATTACCAGA CCATCGTGTC CAATATCAAG
AAATTCTCGA CGGGTGGCAA GACCGCCGTC GTATCCACCA TCAACGGTGA TTCCAACGTG
CCGTTCTATA AAGAGCTGGC GAATCAGGGA ATCAAAGCGA CCGATGTCCC CGTTGTTGCG
TTCTCGGTCG GTGAAGAGGA ACTGCGTGGC ATCGACACCA AACCGCTGGT CGGTCATTTA
GCGGCATGGA ACTACTTTGA ATCGGTAGAT AACCCAACCA ATGCCGACTT CGTAGAAGCC
TATAAAGCCT ATGCCAAAGC GAGAAACCTG CCGAACGCCG GCACAGTGGT GACTAACGAT
CCGATGGAAG CGACCTATGT GGGCATTCAT ATGTGGGCGC AGGCGGTAGA GAAAGCAGGC
ACCACGGACG TGGATAAAGT CCGTGCCGCG ATGGCTGGCC AAACCTTTGC CGCGCCAGAT
GGCTTTACGC TGACGATGGA CAAGACCAAC CACCATCTGC ACAAGCCGGT GATGATTGGT
GAGATTGAGG AAAACGGCCA GTTCAACGTG GTCTGGCAAA CGGATAAACC GGTTCGCGCG
CAGCCGTGGA GCCCGTACAT CGCTGGCAAT GATAAGAAAC CCGATCATCC AATCAAAGCC
GCACAGTAA
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| Protein sequence | MKRRSLLKVF ALSATVVGMG LTWSVQAADT IKVGIMHSLS GTMAISETPL KDVALMTIDE
INAKGGVLGK KLEPVVVDPA SNWPLFAEKA RQLLTQDKAA VVFGCWTSVS RKSVLPVFEE
LNGLLFYPVQ YEGEEMSPNV FYTGAAPNQQ AIPAVEYLMS EDGGAAKRFF LLGTDYVYPR
TTNKILRAFL HSKGVQDKDI EEVYTPFGHS DYQTIVSNIK KFSTGGKTAV VSTINGDSNV
PFYKELANQG IKATDVPVVA FSVGEEELRG IDTKPLVGHL AAWNYFESVD NPTNADFVEA
YKAYAKARNL PNAGTVVTND PMEATYVGIH MWAQAVEKAG TTDVDKVRAA MAGQTFAAPD
GFTLTMDKTN HHLHKPVMIG EIEENGQFNV VWQTDKPVRA QPWSPYIAGN DKKPDHPIKA
AQ
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