| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PC1_2160 |
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| Symbol | |
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| ID | 8133104 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pectobacterium carotovorum subsp. carotovorum PC1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012917 |
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| Strand | - |
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| Start bp | 2466845 |
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| End bp | 2468464 |
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| Gene Length | 1620 bp |
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| Protein Length | 539 aa |
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| Translation table | 11 |
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| GC content | 57% |
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| IMG OID | 644865448 |
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| Product | urea ABC transporter, permease protein UrtB |
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| Protein accession | YP_003017735 |
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| Protein GI | 253688545 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0559] Branched-chain amino acid ABC-type transport system, permease components |
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| TIGRFAM ID | [TIGR03409] urea ABC transporter, permease protein UrtB |
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 0.361023 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGTGCCGA ATAGATATTT TCTCTCTTAT ATGGCGGACA TTGCGATGAT TAATCGTCAA
TTATCTACGT TTGTGCTGTC GCTGTGTCTG ATGCTTCCCT GGCTGGCACA CGCTGGGCCT
GCGGCCGATT TCGCCGCCGC CAGCCGCACG CAGCAGGCCG AACTGTTGCA GCAATGGGCC
GCAGCGCCGG AACCGGCGCG TTTGCCGCTG TTACAGGCGC TGCGTAATGA ATCGGTGGTA
CTCGATCAGA ATCAGCAGCC GTTTAGGGAT ATGCAGGGTA CGTTAACGCC GCTGGAAGGG
AACGCGGAAC CGGTTGGTGC GACGAAAAAA CTCTTTATGA ACAACCGTCT GCGCGTGCTG
GTTGCCACTG CATTGGCTTC ACATCAGCTT GTCAGCGACG ATGTCGCCAC TCGCCTGAAT
GCCGTACGGC AGTTGCAGAG CGAGAGCAGT GCAGAGCAGC TGCCGCTGTT GATGCAGCGC
CTTGAGGTAG AAAAAGACGC ACAGGTTCAC GATGCGCTGA ATATCGCCAT TGCGACCCGG
CAGTTAAGTG ATGCCAATCC GCTGGTGCGA CTTGACGCGG TCAAACGCTT AGGACAAACC
GGCGATCCGC AAATGCAGGC GCTGTTACAG CCGTTGACGC AGGCACAAAA TGAATCAGAT
ACCGGCGTAC GTGCTGCGGC GCAGGCGAGT CTGGATCAGA TTAAACAAAG TTTGATCGTT
GGCGATCTGC TGGGACAGGC GTTTACCGGC TTGTCGCTCG GCTCTATTTT GCTGCTGGCG
GCGCTGGGGC TGGCAATCAC CTACGGGTTG CTGGGCGTCA TCAACATGGC GCACGGTGAA
ATGCTGATGC TGGGAGCATA CGCAACCTGG CTGGTGCAGT CGCTGTGTCA ACAGTTTGCG
CCCGGCTGGC TGGCGTATTA TCCGCTGCTG GCGCTGCCTG TCGCTTTTTT CATTACCGCT
GGCGTCGGGA TGGCGCTGGA GCGCACGGTG ATTCGTCATC TTTATGGCCG ACCACTGGAA
ACGCTGCTGG CGACCTGGGG GATTAGCCTG ATGCTGATCC AACTGGTGCG GATGCTGTTC
GGGACGCAGA ATCTGGAAGT GGCGAACCCC GCGTGGCTGT CTGGCGGGTT GCGTGTATTG
TCGAATCTGG TGCTGCCGTA TAACCGCATC GCAGTCATCC TGTTTGTCCT CGGCGTGCTG
CTGCTCACCT GGATCTTACT CAATAAAACC CGCCTTGGCA TGAATGTGCG GGCGGTGACG
CAAAACCGGG CGATGGCGGA CTGCTGCGGT GTGCCGACTG GACGTGTCGA TATGCTGGCT
TTTGGTCTTG GTTCGGGCAT CGCAGGTCTT GGCGGTGTGG CGCTGTCGCA ATTGGGCAAC
GTCGGGCCGG AATTGGGACA AGGCTACATC ATTGATTCCT TCCTCGTCGT CGTGCTGGGT
GGCGTTGGGC AGCTTGCGGG AACGGTGGTG GCCGCGTTCA GCCTCGGTAT TCTCAATAAG
GTACTGGAAC CGCAGATTGG TGCGGTGCTG GGAAAAATCG TCATTCTGGT CCTGATCGTG
CTGTTTATTC AGAAACGGCC ACAGGGGTTG TTTGCATTCA AAGGACGGGT GATTGACTGA
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| Protein sequence | MVPNRYFLSY MADIAMINRQ LSTFVLSLCL MLPWLAHAGP AADFAAASRT QQAELLQQWA
AAPEPARLPL LQALRNESVV LDQNQQPFRD MQGTLTPLEG NAEPVGATKK LFMNNRLRVL
VATALASHQL VSDDVATRLN AVRQLQSESS AEQLPLLMQR LEVEKDAQVH DALNIAIATR
QLSDANPLVR LDAVKRLGQT GDPQMQALLQ PLTQAQNESD TGVRAAAQAS LDQIKQSLIV
GDLLGQAFTG LSLGSILLLA ALGLAITYGL LGVINMAHGE MLMLGAYATW LVQSLCQQFA
PGWLAYYPLL ALPVAFFITA GVGMALERTV IRHLYGRPLE TLLATWGISL MLIQLVRMLF
GTQNLEVANP AWLSGGLRVL SNLVLPYNRI AVILFVLGVL LLTWILLNKT RLGMNVRAVT
QNRAMADCCG VPTGRVDMLA FGLGSGIAGL GGVALSQLGN VGPELGQGYI IDSFLVVVLG
GVGQLAGTVV AAFSLGILNK VLEPQIGAVL GKIVILVLIV LFIQKRPQGL FAFKGRVID
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