| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PC1_2158 |
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| Symbol | |
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| ID | 8133102 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pectobacterium carotovorum subsp. carotovorum PC1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012917 |
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| Strand | - |
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| Start bp | 2464940 |
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| End bp | 2465776 |
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| Gene Length | 837 bp |
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| Protein Length | 278 aa |
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| Translation table | 11 |
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| GC content | 57% |
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| IMG OID | 644865446 |
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| Product | urea ABC transporter, ATP-binding protein UrtD |
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| Protein accession | YP_003017733 |
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| Protein GI | 253688543 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG4674] Uncharacterized ABC-type transport system, ATPase component |
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| TIGRFAM ID | [TIGR03411] urea ABC transporter, ATP-binding protein UrtD |
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 0.3707 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACTGAGC CTGTATCTGT ATCCTCAGTG GCGGCACCGT CGATTGCTTC ACAGACCCAG
TTTGCCCAGC GACACCCGTC AGATCGCCAT CGGCACCAGA CCGATCCGGT ACTGCAACTC
GACAAAATTA ATGTGAGTTT TGACGGTTTC CGGGCGCTGA CCGATCTCTC GTTGCAGATT
GGCGTGGGGG AATTGCGTTG CATCATCGGA CCTAACGGCG CGGGGAAAAC CACGCTGATG
GATGTCATTA CCGGTAAAAC GCGCCCGGAT AGCGGTAAGG TGTTTTACGA TCAGTTCACT
GACCTGACGA CACTATCGCC AGTGGACATT GCCCGTGCGG GAATAGGGCG GAAATTCCAA
AAACCGACGG TGTTTGAAGC GCTGACGGTG TTCGAAAACC TCGAAATCGC ATTGAAAACG
GATAAATCGG TGTGGGCAAG CCTGCGTGCC AGGCTGAACG GCGAACAACG TGACCGGATT
GACGAGACGC TGACGCTGTT GCGGCTCGGC CACGAACGGC AGCGGCCTGC GGGGCTGTTG
TCGCACGGGC AAAAACAGTT TCTGGAGATC GGCATGCTGT TGGTTCAGGA ACCGCATCTG
CTGTTGCTCG ATGAACCTGC AGCCGGGATG ACTGACGCAG AAACCGCCTA TACCGCCGAG
CTGTTCCGCA GCCTGGCAGG CAAACACTCG CTGATGGTAG TGGAACACGA TATGGGCTTT
GTCGAGAGTA TTGCTGACCA CGTTACGGTG TTGCATCAGG GACAGGTGCT GGCGGAAGGC
TCGCTGCGCG AGGTGCAGGC GAATGAGCAG GTCATTGACG TTTATCTGGG GCGCTAA
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| Protein sequence | MTEPVSVSSV AAPSIASQTQ FAQRHPSDRH RHQTDPVLQL DKINVSFDGF RALTDLSLQI
GVGELRCIIG PNGAGKTTLM DVITGKTRPD SGKVFYDQFT DLTTLSPVDI ARAGIGRKFQ
KPTVFEALTV FENLEIALKT DKSVWASLRA RLNGEQRDRI DETLTLLRLG HERQRPAGLL
SHGQKQFLEI GMLLVQEPHL LLLDEPAAGM TDAETAYTAE LFRSLAGKHS LMVVEHDMGF
VESIADHVTV LHQGQVLAEG SLREVQANEQ VIDVYLGR
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