| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PC1_2154 |
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| Symbol | |
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| ID | 8133098 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pectobacterium carotovorum subsp. carotovorum PC1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012917 |
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| Strand | + |
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| Start bp | 2462067 |
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| End bp | 2462891 |
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| Gene Length | 825 bp |
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| Protein Length | 274 aa |
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| Translation table | 11 |
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| GC content | 55% |
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| IMG OID | 644865442 |
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| Product | ABC transporter related |
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| Protein accession | YP_003017729 |
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| Protein GI | 253688539 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG1126] ABC-type polar amino acid transport system, ATPase component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 5 |
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| Plasmid unclonability p-value | 0.117419 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTCTGAAG CTATCGACTA CTTTGCTCAC ACACGCGCCA CCGCTCAGCC ACAGGCAGAA
AGCGCGCGTG GGCTGATTGA GATTCGCAAC GTGGCGAAGC ATTTTGGTCA ACACAAAGCG
CTGGAGGATA TCAATCTGAC GCTGGCGCCC GGTTCCGTCA CGGTAATCCT CGGCCCATCC
GGTTCGGGGA AATCCACGCT GCTACGCACG ATTAACCATC TTGAACGCGT AGATGAAGGG
TTTATCCGCA TCGACGGCGA CTACATCGGC TATCGCCGCA AAGGGAATAC GCTCTATGAA
TTGAAAGAAA AGGACGTGCT GCGTCAGCGT ATCAACGTCG GTTATGTATT CCAGAACTTC
AATCTGTTCC CCCACCTTTC CGTGTTGGAA AACATCATTG AAGCTCCGCT GGCGCATAAG
CTGTATTCAC GTCAGGAGGC GGAAGATATC GCCTTTACCC TGTTGGAAAG CGTCGGTCTG
CGTCACAAGG CGCAATCTTA TCCCCGCCAC CTTTCCGGTG GTCAGCAGCA GCGCGTCGCC
ATCGCCCGCG CGCTGGCGCT TAAGCCGAAA GTAATGCTGT TTGATGAACC GACGTCCGCG
CTCGATCCCG AACTGGTCGG CGAGGTGCTG GACGTAATCA AATCACTTGC CCGCTCCGGC
GTGACGTTGG TCGTCGTCAC GCATGAAATC GGCTTTGCGC GCGAAGTGGC CGATCGCGTG
GTGTTTATGG TCGATGGAAA AATCGTCGAA AGCGGGGATT CCTGGCAAGT GCTGAACCAT
CCCCGTCACC CGAGAACGAT CAACTTTTTG AATAAGGTGC TGTGA
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| Protein sequence | MSEAIDYFAH TRATAQPQAE SARGLIEIRN VAKHFGQHKA LEDINLTLAP GSVTVILGPS
GSGKSTLLRT INHLERVDEG FIRIDGDYIG YRRKGNTLYE LKEKDVLRQR INVGYVFQNF
NLFPHLSVLE NIIEAPLAHK LYSRQEAEDI AFTLLESVGL RHKAQSYPRH LSGGQQQRVA
IARALALKPK VMLFDEPTSA LDPELVGEVL DVIKSLARSG VTLVVVTHEI GFAREVADRV
VFMVDGKIVE SGDSWQVLNH PRHPRTINFL NKVL
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