Gene PC1_2131 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPC1_2131 
Symbol 
ID8133075 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePectobacterium carotovorum subsp. carotovorum PC1 
KingdomBacteria 
Replicon accessionNC_012917 
Strand
Start bp2436166 
End bp2437230 
Gene Length1065 bp 
Protein Length354 aa 
Translation table11 
GC content52% 
IMG OID644865419 
Producthypothetical protein 
Protein accessionYP_003017706 
Protein GI253688516 
COG category[R] General function prediction only 
COG ID[COG2220] Predicted Zn-dependent hydrolases of the beta-lactamase fold 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCTTTTGT TACTCGTTTT GGCTGTGATT GCAGTGGTCG TTTACGGCTG GTTAAAGCAG 
CCACAATATG TGTCACCAGA GGTAGAACCC CAACCGGAAA ACCCACTCTT TCGCGATGGT
GCGTTTCATA ACCCGGTCGC CCGCCCAACG GTGGCGAGTC AGAACCGCTG GGCTCTGCTG
TACCGCTTTC TTTTTGAGAA AGATGCTGGT GCATTGCCCG ATACCCGCCT GCCGTCGGAA
AAGACCGATC TGCATCAGTT AAGTAAAACG GAAAACGTCA TTATTTGGAT GGGACATTCC
AGCTATTTTA TTCAACTGGA AGGGAAAACT TTCCTGCTGG ATCCGGTATT TAGCGACAAC
GCTTCACCAG TGCCGCGTAC TAATATCGCC TTCAAAGGCA GCAATGTGTA TTCACCGGAA
GACGTTCCCG AAATCGACTA TCTGTTGATT ACCCACGATC ATTGGGATCA TCTGGATTAC
CCCACTCTGA ATGCGCTACG CGGGAAAATC CGCCGCATCG TCACGCCAAC CGGTGTGGGT
TCCTATTTTG TAAAGTGGGG CTTCCCGCAG AAAGATATTA CGGAAGGTGG CTGGTTCAGC
AACCTGAAAG AGAACGGGAT AGAAATTCAT GTGCTGCCGA CACAGCATTT TTCCGGTCGA
CTCCTCAAGC ATAACCAAAC GCTGTGGGGA TCGTTTGCGT TGATCACGCC ACAGCATCGG
TTGTATCTCG GCGGGGACAG CGGCTATGGC GCACACTACA AAGAGATCGC CGCGCGTCTG
GGCGGGTTCG ATATCGCGAT ACTGGAATGC GGACAATACG ATCGGGACTG GCCTCATGTG
CACATGACGC CGGAAGAGAG CGCACTGGCT GCCAGTGATT TGCAGGCTAA AGCGGTACTA
CCGAGCCATA ATAGCAAATT TAAGTTGGCG CACCACCGCT GGAACGATCC ACTGGTGCGT
ATTTCTCAGG CTAGCGAAAA TCAAGACTGG CGACTGATGA CGCCGCGCAT TGGTGAACGT
GTTCAGGTTG ATAACCCGCA GCAGTCGTTT AGTCAGTGGT GGTAG
 
Protein sequence
MLLLLVLAVI AVVVYGWLKQ PQYVSPEVEP QPENPLFRDG AFHNPVARPT VASQNRWALL 
YRFLFEKDAG ALPDTRLPSE KTDLHQLSKT ENVIIWMGHS SYFIQLEGKT FLLDPVFSDN
ASPVPRTNIA FKGSNVYSPE DVPEIDYLLI THDHWDHLDY PTLNALRGKI RRIVTPTGVG
SYFVKWGFPQ KDITEGGWFS NLKENGIEIH VLPTQHFSGR LLKHNQTLWG SFALITPQHR
LYLGGDSGYG AHYKEIAARL GGFDIAILEC GQYDRDWPHV HMTPEESALA ASDLQAKAVL
PSHNSKFKLA HHRWNDPLVR ISQASENQDW RLMTPRIGER VQVDNPQQSF SQWW