| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PC1_2118 |
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| Symbol | |
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| ID | 8133062 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pectobacterium carotovorum subsp. carotovorum PC1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012917 |
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| Strand | + |
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| Start bp | 2422586 |
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| End bp | 2423533 |
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| Gene Length | 948 bp |
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| Protein Length | 315 aa |
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| Translation table | 11 |
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| GC content | 53% |
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| IMG OID | 644865407 |
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| Product | ribose-phosphate pyrophosphokinase |
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| Protein accession | YP_003017694 |
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| Protein GI | 253688504 |
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| COG category | [E] Amino acid transport and metabolism
[F] Nucleotide transport and metabolism |
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| COG ID | [COG0462] Phosphoribosylpyrophosphate synthetase |
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| TIGRFAM ID | [TIGR01251] ribose-phosphate pyrophosphokinase |
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Plasmid Coverage information |
| Num covering plasmid clones | 5 |
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| Plasmid unclonability p-value | 0.092676 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGCCTGATA TGAAGCTTTT TGCTGGTAAC GCCATCCCGG AACTAGCACA ACGTATTGCC
AACCGTTTGT ACACTAGCCT TGGCGACGCC GCTGTCGGTC GTTTTAGCGA TGGCGAAGTC
AGCGTGCAAA TCAATGAAAA TGTACGCGGT GGTGATATTT TCATCATCCA GTCCACCTGT
GCACCCACCA ATGACAACCT GATGGAACTG GTTGTGATGG TCGATGCTCT GCGTCGCGCT
TCCGCGGGAC GCATTACCGC CGTTATCCCC TACTTCGGCT ATGCCCGTCA GGACCGCCGT
GTGCGTTCCG CACGTGTGCC AATCACCGCG AAAGTCGTTG CTGACTTCCT GTCCAGCGTC
GGTGTTGACC GTGTTCTGAC CGTCGATTTG CACGCTGAGC AGATTCAGGG TTTCTTCGAT
GTACCAGTAG ATAACGTATT CGGTAGCCCG ATCCTGCTGG AAGATATGCT GCAACAGAAT
CTAGAAAACC CAATCGTGGT TTCTCCTGAT ATCGGTGGCG TTGTGCGTGC CCGCGCAATC
GCTAAACTGC TGAACGATAC CGACATGGCA ATCATCGACA AGCGCCGTCC GCGCGCCAAC
GTTTCTCAGG TGATGCACAT CATCGGTGAC GTCGCTGGCC GTGACTGTGT GCTGGTTGAC
GATATGATCG ACACTGGCGG TACGCTGTGC AAAGCAGCGG AAGCGCTGAA GGAACGTGGG
GCTAAACGTG TATTCGCTTA TGCCACACAC CCGATCTTCT CAGGCAATGC TTACGAGAAC
ATCAAGAACT CTGTAATTGA TGAAGTGATT GTCTGCGATA CCATTCCGCT GGCGGAAAAC
ATTCGTTCAC TGCCGAATGT TCGTACGTTG ACGCTGTCCG GTATGTTGGC CGAAGCGATT
CGTCGTATCA GCAACGAAGA ATCTATTTCT GCGATGTTTG AGCATTAA
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| Protein sequence | MPDMKLFAGN AIPELAQRIA NRLYTSLGDA AVGRFSDGEV SVQINENVRG GDIFIIQSTC
APTNDNLMEL VVMVDALRRA SAGRITAVIP YFGYARQDRR VRSARVPITA KVVADFLSSV
GVDRVLTVDL HAEQIQGFFD VPVDNVFGSP ILLEDMLQQN LENPIVVSPD IGGVVRARAI
AKLLNDTDMA IIDKRRPRAN VSQVMHIIGD VAGRDCVLVD DMIDTGGTLC KAAEALKERG
AKRVFAYATH PIFSGNAYEN IKNSVIDEVI VCDTIPLAEN IRSLPNVRTL TLSGMLAEAI
RRISNEESIS AMFEH
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