Gene PC1_2118 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPC1_2118 
Symbol 
ID8133062 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePectobacterium carotovorum subsp. carotovorum PC1 
KingdomBacteria 
Replicon accessionNC_012917 
Strand
Start bp2422586 
End bp2423533 
Gene Length948 bp 
Protein Length315 aa 
Translation table11 
GC content53% 
IMG OID644865407 
Productribose-phosphate pyrophosphokinase 
Protein accessionYP_003017694 
Protein GI253688504 
COG category[E] Amino acid transport and metabolism
[F] Nucleotide transport and metabolism 
COG ID[COG0462] Phosphoribosylpyrophosphate synthetase 
TIGRFAM ID[TIGR01251] ribose-phosphate pyrophosphokinase 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.092676 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGCCTGATA TGAAGCTTTT TGCTGGTAAC GCCATCCCGG AACTAGCACA ACGTATTGCC 
AACCGTTTGT ACACTAGCCT TGGCGACGCC GCTGTCGGTC GTTTTAGCGA TGGCGAAGTC
AGCGTGCAAA TCAATGAAAA TGTACGCGGT GGTGATATTT TCATCATCCA GTCCACCTGT
GCACCCACCA ATGACAACCT GATGGAACTG GTTGTGATGG TCGATGCTCT GCGTCGCGCT
TCCGCGGGAC GCATTACCGC CGTTATCCCC TACTTCGGCT ATGCCCGTCA GGACCGCCGT
GTGCGTTCCG CACGTGTGCC AATCACCGCG AAAGTCGTTG CTGACTTCCT GTCCAGCGTC
GGTGTTGACC GTGTTCTGAC CGTCGATTTG CACGCTGAGC AGATTCAGGG TTTCTTCGAT
GTACCAGTAG ATAACGTATT CGGTAGCCCG ATCCTGCTGG AAGATATGCT GCAACAGAAT
CTAGAAAACC CAATCGTGGT TTCTCCTGAT ATCGGTGGCG TTGTGCGTGC CCGCGCAATC
GCTAAACTGC TGAACGATAC CGACATGGCA ATCATCGACA AGCGCCGTCC GCGCGCCAAC
GTTTCTCAGG TGATGCACAT CATCGGTGAC GTCGCTGGCC GTGACTGTGT GCTGGTTGAC
GATATGATCG ACACTGGCGG TACGCTGTGC AAAGCAGCGG AAGCGCTGAA GGAACGTGGG
GCTAAACGTG TATTCGCTTA TGCCACACAC CCGATCTTCT CAGGCAATGC TTACGAGAAC
ATCAAGAACT CTGTAATTGA TGAAGTGATT GTCTGCGATA CCATTCCGCT GGCGGAAAAC
ATTCGTTCAC TGCCGAATGT TCGTACGTTG ACGCTGTCCG GTATGTTGGC CGAAGCGATT
CGTCGTATCA GCAACGAAGA ATCTATTTCT GCGATGTTTG AGCATTAA
 
Protein sequence
MPDMKLFAGN AIPELAQRIA NRLYTSLGDA AVGRFSDGEV SVQINENVRG GDIFIIQSTC 
APTNDNLMEL VVMVDALRRA SAGRITAVIP YFGYARQDRR VRSARVPITA KVVADFLSSV
GVDRVLTVDL HAEQIQGFFD VPVDNVFGSP ILLEDMLQQN LENPIVVSPD IGGVVRARAI
AKLLNDTDMA IIDKRRPRAN VSQVMHIIGD VAGRDCVLVD DMIDTGGTLC KAAEALKERG
AKRVFAYATH PIFSGNAYEN IKNSVIDEVI VCDTIPLAEN IRSLPNVRTL TLSGMLAEAI
RRISNEESIS AMFEH