Gene PC1_2115 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPC1_2115 
SymbolhemA 
ID8133059 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePectobacterium carotovorum subsp. carotovorum PC1 
KingdomBacteria 
Replicon accessionNC_012917 
Strand
Start bp2419461 
End bp2420717 
Gene Length1257 bp 
Protein Length418 aa 
Translation table11 
GC content55% 
IMG OID644865404 
Productglutamyl-tRNA reductase 
Protein accessionYP_003017691 
Protein GI253688501 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG0373] Glutamyl-tRNA reductase 
TIGRFAM ID[TIGR01035] glutamyl-tRNA reductase 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.435842 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACCCTGC TTGCGCTTGG TATTAATCAC AAAACCGCAC CGGTTTCTCT GCGTGAACGC 
GTTGTGTTCT CACCAGATAA ACTCGGAGTG GCCCTCGACA GTCTGCTACA GCAACCGCTG
GTGCAGGGCG GCGTTGTGCT GTCTACCTGC AATCGTACGG AACTCTATCT TAGCGTTGAC
GAACAGGAAA ACCAGCGTGA ACAGTTGATT CGCTGGTTGT GTGAATATCA TCAATTGCGC
CCGGAAGACG TCAACGGCAG TCTGTACTGG CATCAGGATA ATGCCGCTGT TAGTCATCTG
ATGCGCGTGG CGAGCGGTCT GGATTCTCTG GTATTAGGCG AACCGCAGAT TTTGGGGCAG
GTGAAGAAAG CGTTTGCCGA ATCACAGCGT GGTCATTCCC TTTCCAGCGA GCTGGAACGT
TTGTTCCAGA AGTCTTTTAC CGTGGCCAAA CGCGTTCGTA CGGAAACGGA TATCGGTGCC
AGCGCGGTGT CGGTGGCATT TGCTGCCTGT ACGCTGGCAC GGCAGATTTT TGAGTCACTG
GCGGATGTCA CGGTGCTGCT GGTCGGTGCC GGAGAAACCA TTGAATTGGT CGCTCGCTAT
CTTCGTGAAC ACAACGTACA GAAAATGGTG ATCGCAAACC GTACCCGTGA ACGTGCGCAG
GCGCTGGCAA CGGAAGTGGG CGCAGAGGTC ATCACGCTGG CAGAGTTGGA TGAACAGCTC
GTTCAGGCTG ATATTGTGAT CAGTTCAACG GCCAGCACGC TGCCGATTAT CGGAAAAGGG
ATGATGGAAC GGACGCTGAA GGCGAGACGG AATCAGCCAA TGCTGATGGT GGATATTGCG
GTTCCGCGTG ATATTGAGCC GGAAGTCGGC AAATTGCCGA ACGTTTATCT CTACAGCGTG
GACGATCTGC ACGCGATTAT TCAGCATAAC CTCGCGCAGC GCAAAGCGGC GGCGGTGCAG
GCCGAATCCA TCGTGCAGCA GGAAAGTTCC GACTTCATGG CGTGGCTGCG TGCGCAGTCA
GCGGTGGAGA CCATTCGCGA TTATCGCGCT CAGGCCGATG AACTGCGTGC GGAAATGACG
GCCAAGGCGC TGGCTGCCAT CCAACAAGGC AATGACGTTG AAGCGGTGAT TCAGGAACTG
ACGCACCGTT TAACCAACCG TCTGATTCAC GCGCCGACCA AATCCCTTCA GCAAGCCGCT
CGTGACGGCG ACCAAAATCG GTTACAAATT TTACGTGACA GCCTTGGGCT GGACTAG
 
Protein sequence
MTLLALGINH KTAPVSLRER VVFSPDKLGV ALDSLLQQPL VQGGVVLSTC NRTELYLSVD 
EQENQREQLI RWLCEYHQLR PEDVNGSLYW HQDNAAVSHL MRVASGLDSL VLGEPQILGQ
VKKAFAESQR GHSLSSELER LFQKSFTVAK RVRTETDIGA SAVSVAFAAC TLARQIFESL
ADVTVLLVGA GETIELVARY LREHNVQKMV IANRTRERAQ ALATEVGAEV ITLAELDEQL
VQADIVISST ASTLPIIGKG MMERTLKARR NQPMLMVDIA VPRDIEPEVG KLPNVYLYSV
DDLHAIIQHN LAQRKAAAVQ AESIVQQESS DFMAWLRAQS AVETIRDYRA QADELRAEMT
AKALAAIQQG NDVEAVIQEL THRLTNRLIH APTKSLQQAA RDGDQNRLQI LRDSLGLD