| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PC1_2112 |
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| Symbol | |
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| ID | 8133056 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pectobacterium carotovorum subsp. carotovorum PC1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012917 |
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| Strand | - |
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| Start bp | 2417093 |
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| End bp | 2417488 |
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| Gene Length | 396 bp |
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| Protein Length | 131 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 644865401 |
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| Product | Invasion gene expression up-regulator SirB |
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| Protein accession | YP_003017688 |
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| Protein GI | 253688498 |
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| COG category | [S] Function unknown |
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| COG ID | [COG3094] Uncharacterized protein conserved in bacteria |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 0.237229 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | GTGATAACTC TTTACCCAGC CACGATATAT CTGCATCTGG CAACGGTTGG CATCAGTATT
TCTCTGTTTA TTATTCGTTT TTTTTGGCTG TGCCAGCAAT CAGCGCTGCT GCAACAGCGT
TGGGTGAAAA TCCTGCCGCA CATTAACGAT ACCTTGTTAT TAATCAGCGG TATTGGTTTA
ATCACGCTTA GCCATACTTA TCCGTTTACT CCCGAGCAAA GCTGGCTGAC GGAAAAACTG
TTTGGCGTTA TTATTTATAT CCTTCTTGGC GCGATCGCCT TGGGGAAACG CCCCCGTAGC
CAGAAAGTTC GCTGGCTGGC GTTTGTATCT GCTTTAATGT GCTTTGGTGT GGTCGTGCTG
TTGGCACTGA CTCAGTCACC GTTGCTGATG GAATAA
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| Protein sequence | MITLYPATIY LHLATVGISI SLFIIRFFWL CQQSALLQQR WVKILPHIND TLLLISGIGL
ITLSHTYPFT PEQSWLTEKL FGVIIYILLG AIALGKRPRS QKVRWLAFVS ALMCFGVVVL
LALTQSPLLM E
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