Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PC1_2107 |
Symbol | pntB |
ID | 8133051 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pectobacterium carotovorum subsp. carotovorum PC1 |
Kingdom | Bacteria |
Replicon accession | NC_012917 |
Strand | - |
Start bp | 2410778 |
End bp | 2412166 |
Gene Length | 1389 bp |
Protein Length | 462 aa |
Translation table | 11 |
GC content | 53% |
IMG OID | 644865396 |
Product | pyridine nucleotide transhydrogenase |
Protein accession | YP_003017683 |
Protein GI | 253688493 |
COG category | [C] Energy production and conversion |
COG ID | [COG1282] NAD/NADP transhydrogenase beta subunit |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 6 |
Plasmid unclonability p-value | 0.326221 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGTCTGGTG GATTAGTAAC TGCTGCATAC ATTGTTGCCG CAATTCTCTT TATTTTCAGT TTGGCCGGGT TGTCCAAGCA CGAAACGTCG CAACAAGGGA ACATTTTCGG TATCAGCGGG ATGGCGCTTG CGCTGATCGC GACGATTCTG GGGCCTGATT CTGGCAACGT TGGCTGGATC ATCGTTGCGA TGGTGATCGG TGGGTCAATC GGTATTTATC TGGCGCGTAA GGTTGAAATG ACCGAAATGC CAGAGCTGGT CGCTATTCTT CACAGTTTTG TGGGTCTGGC TGCGGTACTG GTTGGCTTTA ACAGCTTCCT CGATCACGGT GAAATTACCG ATCCGGTGAT GATCAATATC CATTTGACGG AAGTCTTCCT GGGGATCTTC ATCGGTGCCG TGACCTTCAC GGGCTCGGTT ATCGCATTCG GTAAGCTGCG CGGCAAGATC TCTTCCAAGC CGTTGATGCT GCCTCATCGC CATAAAATGA ATCTGGCGGC GTTGGTTGTG TCCTTCCTGC TGCTTCTGGT TTTCGTCAAT ACAGGCAGTG TAGCGCTGCA GGTGCTGGCG TTGATCCTGA TGACGGCCAT TGCACTGGTG TTTGGTTGGC ATCTGGTTGC ATCGATTGGC GGTGCTGACA TGCCAGTCGT TGTCTCTATG CTGAACTCCT ACTCCGGTTG GGCGGCAGCG GCAGCAGGCT TTATGCTGAG CAATGACCTG CTGATCGTGA CGGGTGCTCT GGTAGGTTCT TCAGGTGCGA TTCTGTCTTA TATCATGTGT AAAGCGATGA ACCGCTCTTT CATCAGCGTC ATTGCCGGTG GTTTTGGTAC GGACGGCGTT TCCTCCAGTG AGAGCGAAGA GGTCGGGGAA TATCGTGAGG CTTCAGCGGA AGACGTGGCT GATTTGCTCA AGAACTCAAC CTCAGTCATC ATCACGCCGG GATACGGTAT GGCTGTGGCG CAGGCGCAGT ACCCTGTGCA TGACATCACC GCAAAGCTGC GCGCGCGCGG TATCAACGTT CGCTTTGGTA TCCACCCGGT GGCAGGGCGT TTGCCTGGGC ATATGAACGT GCTGTTGGCT GAAGCGAAAG TGCCTTACGA TATCGTATTG GAAATGGATG AAATTAATGA CGATTTCACC GATACCGATG TCGTGCTGGT CATTGGCGCG AATGACACCG TTAACCCGGC AGCGCAGGAA GATCCACATA GCCCAATCGC AGGCATGCCT GTGTTGGAAG TGTGGAAAGC GCAGAATGTT ATCGTGTTCA AGCGTTCCAT GAATACCGGC TACGCTGGCG TGCAGAACCC GCTGTTCTTT AAAGAGAACA CACAAATGCT GTTTGGCGAT GCCAAAGACA GCGTTGAGGC GATTCTGAAA GCACTGTAA
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Protein sequence | MSGGLVTAAY IVAAILFIFS LAGLSKHETS QQGNIFGISG MALALIATIL GPDSGNVGWI IVAMVIGGSI GIYLARKVEM TEMPELVAIL HSFVGLAAVL VGFNSFLDHG EITDPVMINI HLTEVFLGIF IGAVTFTGSV IAFGKLRGKI SSKPLMLPHR HKMNLAALVV SFLLLLVFVN TGSVALQVLA LILMTAIALV FGWHLVASIG GADMPVVVSM LNSYSGWAAA AAGFMLSNDL LIVTGALVGS SGAILSYIMC KAMNRSFISV IAGGFGTDGV SSSESEEVGE YREASAEDVA DLLKNSTSVI ITPGYGMAVA QAQYPVHDIT AKLRARGINV RFGIHPVAGR LPGHMNVLLA EAKVPYDIVL EMDEINDDFT DTDVVLVIGA NDTVNPAAQE DPHSPIAGMP VLEVWKAQNV IVFKRSMNTG YAGVQNPLFF KENTQMLFGD AKDSVEAILK AL
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