Gene PC1_2099 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPC1_2099 
Symbol 
ID8133043 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePectobacterium carotovorum subsp. carotovorum PC1 
KingdomBacteria 
Replicon accessionNC_012917 
Strand
Start bp2402108 
End bp2402833 
Gene Length726 bp 
Protein Length241 aa 
Translation table11 
GC content53% 
IMG OID644865388 
Producthypothetical protein 
Protein accessionYP_003017675 
Protein GI253688485 
COG category[S] Function unknown 
COG ID[COG3496] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.658996 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAATAGCG CGCTGTATGT GGGTAAGGTT CGCCATCGAC GCTTCACGCC CGTTACGCAT 
CGCTTTGACT ATGCGCTATT CATGACGTTA ATCGATTTAG ATGAAATTCC CGCCTTGCCA
CACGTGGGTA TCGCCTTGGA GCGTTTTGCT CCTGCGTCAT TTTGTCGCGG TGATTATCTG
GGCGGTGGCG ATATCAAAAC CAAGGCACAG GATCGGATTG CGGAACTGAC TGGGGAACGC
CTCACGGGGA AAGTGTTGTT GCTGTGCCAA CTGCGCTATC TGGGCTGCTA TTTCAACCCG
GTCAATTTCT ATTATTTGTA CGATGAGCAT AACGAACTAC GCTGGTTATT GGCAGAGGTG
CGTAATACTC CGTGGAACGA ACGCCATACT TATGCCGTCG TCCCCGATGG TTCTACACCT
GTCGCCAAAG CGTTTCATGT GTCGCCTTTT AACCCGATGG ATATGGTGTA TCACTGGCGG
CTAACGCCGC CCGTCGATCG TCTGAGGATC CACATCGAGA ATCACAGACA AGGACGCGAG
TTTGATGCCA CGCTGCTGTT GCACCGTCAG CCGCTCACTC GCGCCGCCCT GCGCGCTCAG
CTTTGGTCTC TGCCGTTAAT GACGATGAAA ACCGCCTGCA CCATATATTG GCAGGCTTTG
AAACTGTGGA TTAAACGCTC GCCCGTTTAT CCCCATCCGC AGTCTGGAAA GAAGGACACC
CCATGA
 
Protein sequence
MNSALYVGKV RHRRFTPVTH RFDYALFMTL IDLDEIPALP HVGIALERFA PASFCRGDYL 
GGGDIKTKAQ DRIAELTGER LTGKVLLLCQ LRYLGCYFNP VNFYYLYDEH NELRWLLAEV
RNTPWNERHT YAVVPDGSTP VAKAFHVSPF NPMDMVYHWR LTPPVDRLRI HIENHRQGRE
FDATLLLHRQ PLTRAALRAQ LWSLPLMTMK TACTIYWQAL KLWIKRSPVY PHPQSGKKDT
P