Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PC1_2099 |
Symbol | |
ID | 8133043 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pectobacterium carotovorum subsp. carotovorum PC1 |
Kingdom | Bacteria |
Replicon accession | NC_012917 |
Strand | + |
Start bp | 2402108 |
End bp | 2402833 |
Gene Length | 726 bp |
Protein Length | 241 aa |
Translation table | 11 |
GC content | 53% |
IMG OID | 644865388 |
Product | hypothetical protein |
Protein accession | YP_003017675 |
Protein GI | 253688485 |
COG category | [S] Function unknown |
COG ID | [COG3496] Uncharacterized conserved protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 9 |
Plasmid unclonability p-value | 0.658996 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAATAGCG CGCTGTATGT GGGTAAGGTT CGCCATCGAC GCTTCACGCC CGTTACGCAT CGCTTTGACT ATGCGCTATT CATGACGTTA ATCGATTTAG ATGAAATTCC CGCCTTGCCA CACGTGGGTA TCGCCTTGGA GCGTTTTGCT CCTGCGTCAT TTTGTCGCGG TGATTATCTG GGCGGTGGCG ATATCAAAAC CAAGGCACAG GATCGGATTG CGGAACTGAC TGGGGAACGC CTCACGGGGA AAGTGTTGTT GCTGTGCCAA CTGCGCTATC TGGGCTGCTA TTTCAACCCG GTCAATTTCT ATTATTTGTA CGATGAGCAT AACGAACTAC GCTGGTTATT GGCAGAGGTG CGTAATACTC CGTGGAACGA ACGCCATACT TATGCCGTCG TCCCCGATGG TTCTACACCT GTCGCCAAAG CGTTTCATGT GTCGCCTTTT AACCCGATGG ATATGGTGTA TCACTGGCGG CTAACGCCGC CCGTCGATCG TCTGAGGATC CACATCGAGA ATCACAGACA AGGACGCGAG TTTGATGCCA CGCTGCTGTT GCACCGTCAG CCGCTCACTC GCGCCGCCCT GCGCGCTCAG CTTTGGTCTC TGCCGTTAAT GACGATGAAA ACCGCCTGCA CCATATATTG GCAGGCTTTG AAACTGTGGA TTAAACGCTC GCCCGTTTAT CCCCATCCGC AGTCTGGAAA GAAGGACACC CCATGA
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Protein sequence | MNSALYVGKV RHRRFTPVTH RFDYALFMTL IDLDEIPALP HVGIALERFA PASFCRGDYL GGGDIKTKAQ DRIAELTGER LTGKVLLLCQ LRYLGCYFNP VNFYYLYDEH NELRWLLAEV RNTPWNERHT YAVVPDGSTP VAKAFHVSPF NPMDMVYHWR LTPPVDRLRI HIENHRQGRE FDATLLLHRQ PLTRAALRAQ LWSLPLMTMK TACTIYWQAL KLWIKRSPVY PHPQSGKKDT P
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