| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PC1_2095 |
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| Symbol | |
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| ID | 8133039 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pectobacterium carotovorum subsp. carotovorum PC1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012917 |
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| Strand | + |
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| Start bp | 2396925 |
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| End bp | 2399387 |
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| Gene Length | 2463 bp |
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| Protein Length | 820 aa |
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| Translation table | 11 |
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| GC content | 55% |
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| IMG OID | 644865384 |
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| Product | putative virulence factor |
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| Protein accession | YP_003017671 |
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| Protein GI | 253688481 |
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| COG category | [S] Function unknown |
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| COG ID | [COG4458] Uncharacterized protein conserved in bacteria, putative virulence factor |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 4 |
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| Plasmid unclonability p-value | 0.180077 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAACGAT TAACGCCCAA ACAGCTTTCT ACCCGGCTCC ACGGCCAGCT ACAGGCAGTC
GCGCAAGGTG TTGAACAGGC CATCGACTGG GTTGAGACTA CCCGTCAGAA CGCCCCGCGC
CTGGATATCG AGGCCGACCG ACTGATTGTC AAACTGCGCC GTAACCACAA CAAAGCGCAG
CACCTGTCCG ATGTGGCGCA GAAAGAGATC GCCATTGGCT TTTTTGGCCT GTCTCAGGCG
GGGAAATCCT ATCTGATCGC GTCGCTGGCC GGGGGAGAAA ACGGCAAGCT GGAAACCTCA
TTTGAAGGGC AACAGCTGGA TTTTATCGAT CATATTAACC CGTCCGACCG GGCAACGGCT
CTCGTTACGC GTTTTAGCCG GCAGTCGGGC ATGAAGAACA AGTCGTTTCC CGTTCAGCTA
CAGCTGCTTA GCGAACTGGA TATCGGCAAG ATTATGGCCA ATGCATTTTT GAATGATCTC
AACCACGAGA CCACGTTTGA AGAGCTGGAT GAGCGCCATA TTGCCGAACA CATTAAAACG
CTGCTGATGC ACCGTCAGCC AGAATCCGTT GAAGGCATGA GCCGCGATGA AGTGGTCGAA
CTTTGGGATT ATCTCGCGCG TCACGATGTC AAACGGCAAA AACAGCTGGA AGCACACTTC
TGGCCGGTTG CGATTGAATT AGCGCCTTAC CTCACCGTTG ATGACCGCGC CCAGCTCTTC
TCCGTATTGT GGGGCGAACT GAATGCGCTG ACCACCGCGT ATCGCCATTT CAGCCACACG
CTGCAACACC TGTCCGGTGC GAGTAAGCTG TTGGCACCGC TACGTACACT GGTCGATGAT
GAGTTAAATC CGGCAGACGG TCTGATCGAC GGTTCGGCGC TGGAACGGCT ACACAGCGCC
GACGATCCCG GCGTGCTGGT GCGGCCGGTT CAGAATGGCC GCGCTGGGAA AACGACGGAG
CTTTCGCTGG CTGAGTTAAC CATGCTGACG GCAGAACTGC TTATCCCACT CCATTTGCCG
CCCAAAGAAG CATTGTTTGA GCAGGTTGAT GTGCTGGATT TCCCCGGTTT TGGTGAACTT
CGCGAAACGC GGGACGAGCC ACCAGCAAGA CGCCAAGCCA CACAGCATCC ACTGGCGCAC
ACATTATTAC GGGCGAAGCG CGCCTATCTG CTGGAACGCT ATACCGATAA TCAGGAAATG
AACGTACTGA TGGTATGCAG CGCCGCAGGC GATCGGGGCG ACGTTAAAGT GGTCGGCAAG
GCGCTGGATC ACTGGGTTAA ACAGACTCAG GGCGAAAACG CGCAGGTACG GAGCCACCGT
AAACCGGGGC TGATTTGGGC GGTTACCCGT CACGATCGCC GTATTACGCA CGGGCAAAAC
TACGACGCAG CGGTACAACG CTATGTGGGT AATCCGGGCG ACGCCTGGGG AACGATGTTG
GCGATGGACA AACGCGGCGT AGCGCGTATG GCAACATGGC TGGGGGCTGA GGTTCATCGT
GAAGTCAAAC TGGGGCGCAT CAGCGAACAG CTCAGCGAAC TTCAACGTGA ACTCAGCGAT
AACCTACTGG GTAACTGGTA TCTGCCCGTC GATGTTGACG ATCCGGCAGA AAAACAGCGC
GTCGCAGAGA CCTTACTCAA ATCTCTCCAG ACCCGTACCG GCGTGCATGG CGAACTGCTG
GAGCGGCTTT TGCCTTCGCG TGATGAACTG CGTCGTCTGT ATCTGCAACA GCAAGGGGCA
AGCTATGGCG GTTTCCATAC CGATGCTGAG GACCTCTCTG CCCCGTTGGC CAATAGCGAT
CCGTTTGGTG TCGGGATCGA AATCGATCTG TTTGCTGATG AACCGATCGC GCTCGACCAG
CCTGTAACGC CAGTATTGAC GCTCGATCAT GGCTATGAGG CCGACTACGC GCACAGCGTT
TACCGTTTCT GGATTAACCA CCTTCGTAGC CTGCCAGAGA ATGCGCCGCT CATTGACCTG
CTCAACGTGT CGAAATCCAC GATCGAAATG CTGGTAGAAG AATTGATTAC CGGTAGCATC
CGTTTGCGGA TCGAAGAAGC GCTGGTCGAT ATGTTGGTTG ATGGTGAGCA GTTGGGCATC
AACCGCGAGA ATAAAGCCGA CCGTCAGGTT TCACGCGTGC TGACCATTCT CGGTGACTTT
GTCGCCTGGC TCGGCTTCCA GCAGCTTGAT GAATCCCTGC GCCCTGCCAG CCGCATCAAT
CGCGGTCATA AAATTTTCGC TAAACCCGAA AAGCAGGCCG TCAGCTTTGG CGCATCTCAA
CGCTTAACCA AACTGTCACT GACACCTACC AACAATACGG CGTTCTATAT CTATGACTGG
CTGGTTGGCC TGAATGAGAT GATTATCCAG AATGCGGGCT ATTCCGCGGC GCGAGAAGTC
AGTGCGGAAC AGCGCGAACA GCTGGGCACG ATTTTGGCGT TGATTAAGCC TGCGGAGAAA
TAA
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| Protein sequence | MKRLTPKQLS TRLHGQLQAV AQGVEQAIDW VETTRQNAPR LDIEADRLIV KLRRNHNKAQ
HLSDVAQKEI AIGFFGLSQA GKSYLIASLA GGENGKLETS FEGQQLDFID HINPSDRATA
LVTRFSRQSG MKNKSFPVQL QLLSELDIGK IMANAFLNDL NHETTFEELD ERHIAEHIKT
LLMHRQPESV EGMSRDEVVE LWDYLARHDV KRQKQLEAHF WPVAIELAPY LTVDDRAQLF
SVLWGELNAL TTAYRHFSHT LQHLSGASKL LAPLRTLVDD ELNPADGLID GSALERLHSA
DDPGVLVRPV QNGRAGKTTE LSLAELTMLT AELLIPLHLP PKEALFEQVD VLDFPGFGEL
RETRDEPPAR RQATQHPLAH TLLRAKRAYL LERYTDNQEM NVLMVCSAAG DRGDVKVVGK
ALDHWVKQTQ GENAQVRSHR KPGLIWAVTR HDRRITHGQN YDAAVQRYVG NPGDAWGTML
AMDKRGVARM ATWLGAEVHR EVKLGRISEQ LSELQRELSD NLLGNWYLPV DVDDPAEKQR
VAETLLKSLQ TRTGVHGELL ERLLPSRDEL RRLYLQQQGA SYGGFHTDAE DLSAPLANSD
PFGVGIEIDL FADEPIALDQ PVTPVLTLDH GYEADYAHSV YRFWINHLRS LPENAPLIDL
LNVSKSTIEM LVEELITGSI RLRIEEALVD MLVDGEQLGI NRENKADRQV SRVLTILGDF
VAWLGFQQLD ESLRPASRIN RGHKIFAKPE KQAVSFGASQ RLTKLSLTPT NNTAFYIYDW
LVGLNEMIIQ NAGYSAAREV SAEQREQLGT ILALIKPAEK
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