Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PC1_2083 |
Symbol | |
ID | 8133027 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pectobacterium carotovorum subsp. carotovorum PC1 |
Kingdom | Bacteria |
Replicon accession | NC_012917 |
Strand | - |
Start bp | 2383480 |
End bp | 2383815 |
Gene Length | 336 bp |
Protein Length | 111 aa |
Translation table | 11 |
GC content | 43% |
IMG OID | 644865372 |
Product | steroid delta-isomerase domain-containing protein |
Protein accession | YP_003017659 |
Protein GI | 253688469 |
COG category | [S] Function unknown |
COG ID | [COG4538] Uncharacterized conserved protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGTCACCAG AGTTGCCTGT AGCAGCGCAA TTTAAAGCAT ACAACGAACA TGATATAGAT GCATTCGTGG CCTGTTTTTC GCCAGATTTT AAAGCGTACC GCATGCCTTC TGAAACACCG TCGATGGTAG GAAAAGAGGC GCTGAGAGCG TTTTACGTGA ATAACCGATT CAATAACCCG CAACTGAGGG CTGAACTGGT ATCTCGTACA GTATTAGGTA ATAAAGTATT CGATCATGAG CTCATTTATG GGCTTTCAGA GGCACCAATA GAAAGCATTG CCGTTTTTGA GGTAGAGGAA AGCCTTATTA AAACCTCCTG GTTTTTCTTT CCGTAG
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Protein sequence | MSPELPVAAQ FKAYNEHDID AFVACFSPDF KAYRMPSETP SMVGKEALRA FYVNNRFNNP QLRAELVSRT VLGNKVFDHE LIYGLSEAPI ESIAVFEVEE SLIKTSWFFF P
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