Gene PC1_2052 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPC1_2052 
Symbol 
ID8132996 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePectobacterium carotovorum subsp. carotovorum PC1 
KingdomBacteria 
Replicon accessionNC_012917 
Strand- 
Start bp2356742 
End bp2357959 
Gene Length1218 bp 
Protein Length405 aa 
Translation table11 
GC content52% 
IMG OID644865342 
Producthypothetical protein 
Protein accessionYP_003017629 
Protein GI253688439 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones9 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGCGAAT TTTATCAAGA TGGCATCATT ACCAATTTTC ACAATCTCAC CCAGAGAAAG 
ACGGAAGAGC TGGAGTATGA ACTTCAGGTA TTTTCCGGAC AAAACAGCAT GGGGTTGATT 
CTGCCCTCGC TGTATTCTGA GCTGGAAGGT CCTGCGCTAA GCCACATTAT TGACCAGCTC 
TCTCAGGTTT CTTACCTTGG CGAAATTGTG ATTGGGTTGG ATCGCGCCGA TCGGGAGCAA 
TTTCTTTACG CACGGCAGTT TTTCTCTCGC CTGCCACACC GGCACCGTAT TCTGTGGAAC 
GATGGCCCAC GCCTGAAAGC GCTCAGCGAT GAACTGGCAG AGAAATCGCT GGCACCGCAG 
GAGCCCGGTA AAGGCCGCAA TGTCTGGTTT TGTGTCGGCT ATACGTTGGC ATCACGCCGT 
TCAGCCTGTG TTGCCCTGCA TGACTGTGAC ATTGTCACGT ATGATCGGGC GATGCTGGCT 
CGCCTGCTCT ATCCCGTAGC GAATCCGCAC TTTAATTATG ATTTCTGCAA AGGCTATTAC 
GCCCGCGTCG CTGAAGGAAA ACTGAATGGC CGTGTGGGAC GTCTGCTGGT TTATCCGTTA 
CTGAAATCGC TGCAAAAGGT TTATGGCAAT TCCGACTATC TGGATTACAT GCGCAGTTAT 
CGCTATCCGC TTTCCGGCGA GTTTGCGATG CGCACCACCA TTCTGAACAA CCTGCGTATT 
CCGAGTGATT GGGGGCTGGA AATTGGCGTG CTGTCAGAAA TTCATCGCGG CACCGCTACC 
CGGCGTATTT GTCAGGTAGA TATCGCGGAT CGCTATGACC ATAAACATCA GCCGATGTCT 
GAAGACGACC CGAACGCAGG GTTACAGCGC ATGGCTGCGG ATATCACCAA AGCGTTGTAT 
CGCAAGCTGG CGATTCTCGG CGTGAATATC ACCTCGGATT CTTTCCGCGT CCTGCGGGCG 
ACCTACTATC GTACCGCTCT TGATATGATC GATGCTTTCG AACATGACGC GCGCATGAAC 
GGCCTGAGTT TCGATCGTCA TAACGAGGAA TCTGCGGTGG AGCTCTTCTC TGATGTGATC 
ACCCATGCTG GCCATGTTTA TAGTGATAGC CCAGGCGATA AACCCTTTGT CCCTAGCTGG 
AACCGCGTGC AGTCGGCTTT TCCCGATATC CTCGAACGCC TGTACGCTGC GGTAGAAGCC 
GACAATCAGG AAACATAA
 
Protein sequence
MSEFYQDGII TNFHNLTQRK TEELEYELQV FSGQNSMGLI LPSLYSELEG PALSHIIDQL 
SQVSYLGEIV IGLDRADREQ FLYARQFFSR LPHRHRILWN DGPRLKALSD ELAEKSLAPQ 
EPGKGRNVWF CVGYTLASRR SACVALHDCD IVTYDRAMLA RLLYPVANPH FNYDFCKGYY 
ARVAEGKLNG RVGRLLVYPL LKSLQKVYGN SDYLDYMRSY RYPLSGEFAM RTTILNNLRI 
PSDWGLEIGV LSEIHRGTAT RRICQVDIAD RYDHKHQPMS EDDPNAGLQR MAADITKALY 
RKLAILGVNI TSDSFRVLRA TYYRTALDMI DAFEHDARMN GLSFDRHNEE SAVELFSDVI 
THAGHVYSDS PGDKPFVPSW NRVQSAFPDI LERLYAAVEA DNQET