Gene PC1_2045 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPC1_2045 
Symbol 
ID8132989 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePectobacterium carotovorum subsp. carotovorum PC1 
KingdomBacteria 
Replicon accessionNC_012917 
Strand+ 
Start bp2350180 
End bp2350845 
Gene Length666 bp 
Protein Length221 aa 
Translation table11 
GC content54% 
IMG OID644865335 
Productputative dithiobiotin synthetase 
Protein accessionYP_003017622 
Protein GI253688432 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG0132] Dethiobiotin synthetase 
TIGRFAM ID[TIGR00347] dethiobiotin synthase 


Plasmid Coverage information

Num covering plasmid clones6 
Plasmid unclonability p-value0.154785 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTTGAAAC GTATTTTTGT CACTGGTACT GATACCGCCG TTGGCAAAAC AGTGGTATCC 
AAGGCGCTAC TGCAAAAACT AGCGCTGGCA GGCAAATCGG TTGCGGGCTA CAAACCGATA 
GCGAAAGGGT GCGAAGAGAC GGAAGCGGGC CTGCGTAATA AAGATGCACT GCTGCTACAG 
GCGGCTTCCA CACTGGAATT GCCCTATAAC ATGGTTAACC CCATCGCTCT GCGAGAGGAT 
GAAATCAGCG CCAGTGAAGG AACGATTGAT TACTGCACGA TGACGCAGGG TTTGCGCCAC 
ATGAGCGAGG CGGCGGATAT CGTGGTGGTC GAAGGCACGG GCGGATGGCG AACTGTCATG 
AACGATCTGC GTCCGTATTC CGAATGGGTC GTACAGGAAC AACTGCCCGT TGTGCTGGTT 
GTTGGCATCA AACTGGGCTG TATCAGCCAT GCGTTGCTGA CGGCGCAGGC AATCATCAAC 
GATGGTTTGC CGCTGGTTGG CTGGGTTGCT AACCGTATTA ACCCCGGTCT GGCGAATTAC 
GCCGAAATCA TTCACGTTCT GCGGAAAAAA ATTCCGGCAC CGCAACTGGG CGAGCTGCCT 
TACTTACCGC GTGCCGAACA GCGGGATCTC TCGCCTTATA TCGATCTTTC TGCCGTCAGC 
AATTAA
 
Protein sequence
MLKRIFVTGT DTAVGKTVVS KALLQKLALA GKSVAGYKPI AKGCEETEAG LRNKDALLLQ 
AASTLELPYN MVNPIALRED EISASEGTID YCTMTQGLRH MSEAADIVVV EGTGGWRTVM 
NDLRPYSEWV VQEQLPVVLV VGIKLGCISH ALLTAQAIIN DGLPLVGWVA NRINPGLANY 
AEIIHVLRKK IPAPQLGELP YLPRAEQRDL SPYIDLSAVS N