| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PC1_2042 |
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| Symbol | |
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| ID | 8132986 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pectobacterium carotovorum subsp. carotovorum PC1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012917 |
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| Strand | - |
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| Start bp | 2346368 |
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| End bp | 2347636 |
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| Gene Length | 1269 bp |
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| Protein Length | 422 aa |
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| Translation table | 11 |
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| GC content | 55% |
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| IMG OID | 644865332 |
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| Product | major facilitator superfamily MFS_1 |
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| Protein accession | YP_003017619 |
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| Protein GI | 253688429 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG2814] Arabinose efflux permease |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 0.316098 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | GTGAGTAACC TGCCATCTTC TGCACCGAAC GACTGGCCCA TTTCTACGGC CGACGATGCG
GATGATATTG CCCTGAGATC TTCGGGAAAA ACGCCTTATA TTACTCGTGG TACGCCACAA
TTTATGCGCG TCACGCTGGC GCTGTTTTCT GCCGGATTAG CGACGTTTGC GTTGCTGTAT
TGTGTTCAGC CCTTGCTGCC TGTGCTCTCT CAGGATTTCG GTATTTCGCC GGCTACCAGT
AGCTTGTCGC TTTCCGTATC GACGGTAATG CTGGCGTTTG GGCTACTGTT CACTGGCCCG
CTCTCCGACA CCATCGGTCG TAAGAATGTC ATGGTCGTCT CTTTGATGCT GGCCGCGCTC
TGTACCGTGA TTTGCGCATT TATGACCAGT TGGAACGGTA TATTGATCAT GCGGGCGATG
ATTGGCCTGT CGCTAAGCGG CGTCGCGGCC GTCGCCATGA GCTACCTGAG TGAAGAAATT
CATCCCAGCG TGCTGGCGTT CTCGATGGGG TTATATATCA GCGGCAACTC GATTGGCGGT
ATGAGCGGAC GTCTGGTGAG CGGCGTCTTG ACGGACTATT TCCCGTGGCG GGTTGCCATC
GGCACGATCG GCGTACTGGC ACTCATTGCG GCGATAACAT TCTGGCGTAT TCTGCCCGAA
TCCCGCCATT TCCGCCCCGG ATCGCTACGA CCGAAGACGC TGCTGCTGAA CAGCAAACTG
CACTGGCGCG ATGCGGGGTT ACCGCTGCTG TTCCTTCAGG GATTTTTACT GATGGGCGCG
TTCGTTACTC TGTTTAACTA CATTGGATAT CGGCTGTTAG CTTCACCGTA TTTACTCAGT
CAGGCGGTAG TTGGCTTACT TTCCGTGGTT TATCTCACCG GAAGTTACAG CTCGCCAAAA
GCCGGAGCAT TAACGGCTCG CTACGGACGC GGCCCCGTAC TCAGCATTTC TATCCTCCTG
ATGCTGACAG GTCTGGGAAT AACGGCACTG ACGCCGGTAT TTGCTATCTT TGGTGGGATG
ATGCTCTTTA CCGCTGGCTT CTTCGCTGCA CACTCGGTGG CAAGCAGTTG GATTGGCCAA
CGGGCACGGC GCGCGAAAGG TCAGGCGTCA TCCATGTATC TCTTTTCTTA CTATCTTGGC
TCGAGTCTGG CAGGTACGCT CGGGGGATTC TTCTGGCATT CATTTGGCTG GACGGGCATC
ACCGTATTTC TGAGCGCACT CTTACTGCTC GCGCTGGGAG TCAGCCTGAT ACTCAAAAAA
CGGCTTTAA
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| Protein sequence | MSNLPSSAPN DWPISTADDA DDIALRSSGK TPYITRGTPQ FMRVTLALFS AGLATFALLY
CVQPLLPVLS QDFGISPATS SLSLSVSTVM LAFGLLFTGP LSDTIGRKNV MVVSLMLAAL
CTVICAFMTS WNGILIMRAM IGLSLSGVAA VAMSYLSEEI HPSVLAFSMG LYISGNSIGG
MSGRLVSGVL TDYFPWRVAI GTIGVLALIA AITFWRILPE SRHFRPGSLR PKTLLLNSKL
HWRDAGLPLL FLQGFLLMGA FVTLFNYIGY RLLASPYLLS QAVVGLLSVV YLTGSYSSPK
AGALTARYGR GPVLSISILL MLTGLGITAL TPVFAIFGGM MLFTAGFFAA HSVASSWIGQ
RARRAKGQAS SMYLFSYYLG SSLAGTLGGF FWHSFGWTGI TVFLSALLLL ALGVSLILKK
RL
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