| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PC1_2027 |
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| Symbol | |
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| ID | 8132971 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pectobacterium carotovorum subsp. carotovorum PC1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012917 |
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| Strand | - |
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| Start bp | 2327205 |
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| End bp | 2328710 |
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| Gene Length | 1506 bp |
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| Protein Length | 501 aa |
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| Translation table | 11 |
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| GC content | 55% |
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| IMG OID | 644865317 |
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| Product | L-arabinose isomerase |
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| Protein accession | YP_003017604 |
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| Protein GI | 253688414 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG2160] L-arabinose isomerase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.929629 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGATCATT TTAAGCAGCT TGAAGTCTGG TTCGTCATCG GTAGCCAGCA CCTCTACGGG
CCGGAAACGT TGCGTCAGGT AAAAGAGAAC GCGGAAAAGG TCGTCACCGG GTTGAATCAA
CAGGCGAACC TGCCGGTTAA GCTGGTGCTG AAACCGCTGG TGAAAACACC GGACGAAATT
CTTGCGCTGT GTCGCGATGC CAACTATCAG GATAACTGTA TCGGCCTGCT GACCTGGCTG
CATACGTTCT CTCCAGCCAA AATGTGGATT GGTGGCCTGA GCATACTCAG TAAACCACTG
CTGCAATTCC ACACCCAGTT CAATGCCGAA GTGCCGTGGG ATACCATGGA CATGGATTTC
ATGAACCTGA ACCAGACCGC GCACGGCGGA CGCGAATTTG GCTTTATCGG TGCCCGGATG
CGGCAAGCGC ATCAGGTCGT CGTCGGCCAC TGGCAGGATA AAAACGCCCA TGCCCGTATC
GGGAAATGGA TGCGGGTAGC TGCCGCCATT CAGGAAAGTA AACAGCTGAA GGTCGCGCGC
TTTGGCGACA ACATGCGTGA AGTCGCCGTC ACCGAAGGCG ATAAAGTCGG CGCGCAGATC
CAGTTCGGTT ATTCCGTCAG CGCTTGGGGA CTGGGCGATT TAACCGCCGT GGTTGATGCC
GTATCCAAAG GCGATATCAA TGCGCTGGTC GACGAATACG AAGCCAGCTA CCAGTTAACG
GATGCGGTGA AACTCAACGG CGCTAACCGC CAGAACCTGC TGGATGCAGC ACAGATCGAA
CTCGGGATGA AACGCTTTCT GGAACAAGGC GGCTACCATG CGTTCACTAC CGATTTTGAA
AACCTGTATG GCCTGAAACA ACTGCCGGGG CTGGCGGTGC AGCGTCTAAT GCAACAGGGC
TATGGTTTCG GTGGCGAAGG CGACTGGAAA ACCGCCGCGC TACTGCGCAT CATGAAAGTG
ATGGCCAGCG GTTTGTCGGG CGGAACGTCC TTCATGGAGG ATTACACCTA TAACTTCCAG
AATGGTAACG ATCTGGTCGT TGGCTCCCAT ATGCTGGAAG TCTGCCCCAC CATTGCAAAA
GAACAGAAAC CGATTCTGGA TGCGCAATAC CTTGGCATTG GTGGAAAAGC CGACCCTGCT
CGGTTGATTT TCTCCACGCC AGCCGGGCCG TCACTGAATG CCAGTGTGAT CGACATGGGC
GACCGTTTCA GAATGCTGGT TAATCTGGTC GATACGATCG AACAGCCGCA CCCATTGCCG
AAATTGCCGG TTGCCCGCGC CATCTGGAAA GCGCAACCGT CGCTGGACGT GGCGGCCGAA
GCCTGGATTC TGGCTGGCGG TGCGCATCAC ACCGTCTTTA GTCAGGCGTT AGATCTCGAA
CACATGCGGC TCTACGCCGA GATGCAGAAC ATTGAACTGT TGGTGATCGA CAACGAAACC
CGACTCCACG AATTCAAAGA TGCGCTGCGC TGGAACGAGG TGTACTACAA GCTGTGTAGT
CGCTAG
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| Protein sequence | MDHFKQLEVW FVIGSQHLYG PETLRQVKEN AEKVVTGLNQ QANLPVKLVL KPLVKTPDEI
LALCRDANYQ DNCIGLLTWL HTFSPAKMWI GGLSILSKPL LQFHTQFNAE VPWDTMDMDF
MNLNQTAHGG REFGFIGARM RQAHQVVVGH WQDKNAHARI GKWMRVAAAI QESKQLKVAR
FGDNMREVAV TEGDKVGAQI QFGYSVSAWG LGDLTAVVDA VSKGDINALV DEYEASYQLT
DAVKLNGANR QNLLDAAQIE LGMKRFLEQG GYHAFTTDFE NLYGLKQLPG LAVQRLMQQG
YGFGGEGDWK TAALLRIMKV MASGLSGGTS FMEDYTYNFQ NGNDLVVGSH MLEVCPTIAK
EQKPILDAQY LGIGGKADPA RLIFSTPAGP SLNASVIDMG DRFRMLVNLV DTIEQPHPLP
KLPVARAIWK AQPSLDVAAE AWILAGGAHH TVFSQALDLE HMRLYAEMQN IELLVIDNET
RLHEFKDALR WNEVYYKLCS R
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