| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PC1_2023 |
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| Symbol | |
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| ID | 8132967 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pectobacterium carotovorum subsp. carotovorum PC1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012917 |
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| Strand | - |
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| Start bp | 2323115 |
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| End bp | 2325358 |
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| Gene Length | 2244 bp |
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| Protein Length | 747 aa |
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| Translation table | 11 |
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| GC content | 58% |
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| IMG OID | 644865313 |
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| Product | electron transport complex protein RnfC |
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| Protein accession | YP_003017600 |
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| Protein GI | 253688410 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG4656] Predicted NADH:ubiquinone oxidoreductase, subunit RnfC |
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| TIGRFAM ID | [TIGR01945] electron transport complex, RnfABCDGE type, C subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCTTAAGC TGTTTTCCGC CTTTAAAAAA GACAGGATTT GGGATTTCGA CGGCGGCATT
CATCCGCCGG AAATGAAGAC GCAGTCCAGC CGGACGCCGC TGCGCCAGAT TCCTCTGCCA
GAACAGTTCA TTATTCCACT CAAGCAGCAT CTTGGGCCGG AAGGAGAGAT CTGCGTCAGC
GTCGGCGATA AAGTGCTGCG CGGCCAACCG CTCACCCGAG GCAGAGGCCG CACCTTGCCC
GTTCACGCAC CGACGTCGGG AACGGTGAAC GCAATCCGTC AGCACACGAC GGCACATCCT
TCTGGCTTGT CCGAACTCAG CATCATTATC GTGCCGGATG GTGAAGATCG CTGGAGCGAT
CGCCAGACTT TGGCGGATTA TCAAACACAG AGCACCGACA CCCTGCTTGC CCATCTGCAT
CAGGCGGGGA TTGCAGGACT AGGCGGCGCA GGGTTCCCTA CCGCCGCCAA GTTACAGGGT
GGGATGCGAG GGATTGAAAC CCTGATCATC AACGGCGCAG AATGTGAACC CTATATCACC
GCCGACGATC GACTCATGCA GGAGTGCGCC GACGAGATAA TTCAGGGCGT CGAGATTCTG
TCATTCCTGT TGCAGCCGAA ACGTATTCTG ATCGGGATCG AAGATAACAA ACCGGAAGCC
ATCAGCGCCC TGCGGCTGGC GTTGGGTAAA CGCAGCGATA TGCAGTTACG CGTCATCCCC
ACCAAGTATC CATCAGGCGG CGCCAAGCAA CTCACCAAGA TTCTGACGGG CAAAGAAGTC
CCGTTCGGGA AACACTCCGC CGCGATTGGC GTACTAATGC AGAACGTCGG TACGGCCTTC
GCCATCAAAC GTGCGGTGAT CGACGGCGAG CCGCTCACCG AACGCGTGGT GACACTCACG
GGTGAAGCCT TACGTCAACC CGGTAACGTG TGGGCGCGAC TGGGGACGCC AGTGCGTCAC
CTGCTTAAAC AGGGCGGCTT CCATGTCAAT AAGCAGCCGA TGGTGGTGAT GGGCGGTCCG
CTGATGGGCT TTACCCTGCC GTCGCTGGAT GTGCCGATCG TCAAAATCAG CAACTGCCTG
CTTGCACCGT CACATACGGA AATGGAGCCC GTTGCCGAAG AGCAGTCCTG TATTCGCTGT
AGCCAATGTG CCGATGCCTG TCCGGCAGGC CTTTTGCCAC AGCAGCTTTA CTGGTTCAGC
CGCGGGCAGG AACACGAAAA AGCGCGCAAT CACCATCTGT TTGACTGTAT CGAATGCGGT
GCCTGCGCTT ACGTCTGCCC CAGCAACATC CCACTGGTTC AGTATTACCG TCAGGAAAAA
GCCGAAATTC GGGCAATCGA CGAAGACGCA CAGCGTGCCG CGCAGGCTAA AGTGCGCTTT
GATGCTAAAC AGGCGCGTCT GGAACGGGAA AAAGCCGCGC GCGAACTGCG TCATAAACAG
GCAGCGACTG GCGTATCTAC TAGCGATAAA GATGCCGTCC AGGCAGCGCT GGAACGCGTG
CGTCGCAAGC AAAGCACCAC AACAGAGATT GGGGCACCAA TCGCGGTTAT GCCTGATGCG
CAGCCGGATA ACAGTGCTGC CATCGCCGCA CGCGCGGCAC GGAAGGCATT AGTTCGTGAA
GAGCGAGCGC GTGAAAACCA GACGCAACAG GAAACACCAA CGGTCGACGT ACCTTCCACC
GAGCTTGATG ATCCTCGCAA AGCGGCAGTC GCCGCCGCTC TTGCACGCGT TAAAGCCCGT
AAGGCTGCAC AGCAGACGGC GACAAACGCA GAAGCTCCCG TTTCATCGGT TACCTCTGAC
GTAGTTGCAG AACCTGTTGC GGTCGTTGAA ACACAAGAGC CGGACGATCC CCGCAAGGCT
GCTGTTGCTG CCGCCATCGC TCGCGTTAAA GCCCGTAAGG CTGCACAGCA GACGGCGACA
AACGCAGAAG CTCCCGTTTC ATCGGTTACC TCTGACGTAG TTGCAGAACC TGTTGCGGTC
GTTGAAACAC AAGAGCCGGA CGATCCCCGC AAGGCTGCTG TTGCTGCCGC CATCGCTCGC
GTTAAAGCCC GTAAGGCTGC CCAGCAGACG GCGACAAACG CAGAAGCTCC CGTTTCATCG
GTTGCCTCTG ACATAGTTGC AGAACCTGTC GCGGTCGTTG AAACACAAGA GCCGGAAGAT
CCGCGCAAGG CTGCTGTTGC TGCCGCTATC GCTCGCGTTA AAGCCCGTAA AGCCGCGCAG
GCATCGTCAC ATCAAGAGGA ATAA
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| Protein sequence | MLKLFSAFKK DRIWDFDGGI HPPEMKTQSS RTPLRQIPLP EQFIIPLKQH LGPEGEICVS
VGDKVLRGQP LTRGRGRTLP VHAPTSGTVN AIRQHTTAHP SGLSELSIII VPDGEDRWSD
RQTLADYQTQ STDTLLAHLH QAGIAGLGGA GFPTAAKLQG GMRGIETLII NGAECEPYIT
ADDRLMQECA DEIIQGVEIL SFLLQPKRIL IGIEDNKPEA ISALRLALGK RSDMQLRVIP
TKYPSGGAKQ LTKILTGKEV PFGKHSAAIG VLMQNVGTAF AIKRAVIDGE PLTERVVTLT
GEALRQPGNV WARLGTPVRH LLKQGGFHVN KQPMVVMGGP LMGFTLPSLD VPIVKISNCL
LAPSHTEMEP VAEEQSCIRC SQCADACPAG LLPQQLYWFS RGQEHEKARN HHLFDCIECG
ACAYVCPSNI PLVQYYRQEK AEIRAIDEDA QRAAQAKVRF DAKQARLERE KAARELRHKQ
AATGVSTSDK DAVQAALERV RRKQSTTTEI GAPIAVMPDA QPDNSAAIAA RAARKALVRE
ERARENQTQQ ETPTVDVPST ELDDPRKAAV AAALARVKAR KAAQQTATNA EAPVSSVTSD
VVAEPVAVVE TQEPDDPRKA AVAAAIARVK ARKAAQQTAT NAEAPVSSVT SDVVAEPVAV
VETQEPDDPR KAAVAAAIAR VKARKAAQQT ATNAEAPVSS VASDIVAEPV AVVETQEPED
PRKAAVAAAI ARVKARKAAQ ASSHQEE
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