| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PC1_2020 |
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| Symbol | |
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| ID | 8132964 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pectobacterium carotovorum subsp. carotovorum PC1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012917 |
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| Strand | - |
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| Start bp | 2320715 |
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| End bp | 2321422 |
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| Gene Length | 708 bp |
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| Protein Length | 235 aa |
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| Translation table | 11 |
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| GC content | 56% |
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| IMG OID | 644865310 |
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| Product | electron transport complex RsxE subunit |
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| Protein accession | YP_003017597 |
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| Protein GI | 253688407 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG4660] Predicted NADH:ubiquinone oxidoreductase, subunit RnfE |
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| TIGRFAM ID | [TIGR01948] electron transport complex, RnfABCDGE type, E subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGAGTCAGA CCAAAGCGCT TTTTATTGAA GGGTTATGGA AGAACAACTC GGCACTGGTT
CAATTGCTGG GTCTCTGCCC CCTGCTCGCC GTGTCATCCA CCGCAACGAA CGCGTTGGGG
CTCGGACTGG CAACCACGCT GGTACTCACC TGTACCAACA TGGCCGTTTC TGCGCTACGC
CGCTGGGTGC CAGCGGAAAT TCGTATTCCT ATTTACGTCA TGATCATCGC CTCGGTGGTC
AGCACCGTGC AGATGTTGAT CAACGCCTAT GCCTACGGCT TATATCAGTC GCTGGGGATC
TTTATTCCTC TGATTGTGAC GAACTGTATC GTTATCGGTC GCGCCGAAGC CTTCGCGTCC
AAGAATGCCG TCTTCCCTTC GGCTATTGAC GGCCTGGCGA TGGGGCTGGG AGCCACCAGC
GCGCTGGTAG TGCTCGGTTC TTTACGTGAA ATTCTGGGTA ACGGCACGCT GTTCGACGGC
GCGGATTTGC TGTTGGGTAG TTGGGCTAAA TCTCTCCGTA TCGAGGTTGT ACACCTTGAC
TCCCCGTTCC TGCTGGCGAT GCTGCCACCG GGCGCCTTTA TTGGTCTGGG ACTGTTGCTG
GCTGCGAAAT ATTTGATCGA TGAGAAAATG AAACAACGTC GAGCTCGCGC CGCTGCCACC
GAAGAGAAAG CCGCGCCGGC AACCGGCACC GTAGGGGAAT CGCTGTGA
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| Protein sequence | MSQTKALFIE GLWKNNSALV QLLGLCPLLA VSSTATNALG LGLATTLVLT CTNMAVSALR
RWVPAEIRIP IYVMIIASVV STVQMLINAY AYGLYQSLGI FIPLIVTNCI VIGRAEAFAS
KNAVFPSAID GLAMGLGATS ALVVLGSLRE ILGNGTLFDG ADLLLGSWAK SLRIEVVHLD
SPFLLAMLPP GAFIGLGLLL AAKYLIDEKM KQRRARAAAT EEKAAPATGT VGESL
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