Gene PC1_2019 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPC1_2019 
Symbol 
ID8132963 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePectobacterium carotovorum subsp. carotovorum PC1 
KingdomBacteria 
Replicon accessionNC_012917 
Strand- 
Start bp2320083 
End bp2320718 
Gene Length636 bp 
Protein Length211 aa 
Translation table11 
GC content52% 
IMG OID644865309 
Productendonuclease III 
Protein accessionYP_003017596 
Protein GI253688406 
COG category[L] Replication, recombination and repair 
COG ID[COG0177] Predicted EndoIII-related endonuclease 
TIGRFAM ID[TIGR01083] endonuclease III 


Plasmid Coverage information

Num covering plasmid clones9 
Plasmid unclonability p-value0.734703 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGAACAAAG CCAAACGGAT TGAGATCTTG ACGCGTTTAC GCGCTAACAA TCCTCATCCC 
ACAACTGAAT TGCAGTTCAG TACACCGTTT GAGCTGCTCA TCGCCGTTCT GCTTTCCGCG 
CAGGCAACCG ATGTCAGCGT CAACAAGGCA ACGGCAAAAC TCTACCCTGT CGCGAATACG 
CCGGAAACCC TGCTCGCACT CGGTGTAGAC GGCGTGAAAG ACTACATCAA AACCATCGGT 
TTGTTTAACA GCAAGGCGGA GAACGTCATC AAAACCTGCC GTCTATTGCT GGAAAAGCAT 
CAGGGACAGG TTCCTGAAGA TCGCGCGGCA CTGGAAGCCT TACCGGGTGT CGGACGGAAA 
ACCGCAAACG TGGTTCTGAA TACCGCGTTT GGCTGGCCGA CCATTGCTGT TGATACCCAC 
ATATTTCGTG TCAGCAACCG CACAGGGTTT GCGCCGGGTA AAAACGTTGA GCAGGTAGAG 
GAAAAACTGC TGAAAGTCGT TCCAGCAGAA TTTAAAGTCG ACTGCCATCA CTGGCTAATT 
CTGCATGGTC GTTACACCTG CATCGCACGC AAACCACGCT GTGGTTCCTG CCTGATTGAA 
GATTTGTGCG AATTTGGTGA GAAGATCGAC GCCTAA
 
Protein sequence
MNKAKRIEIL TRLRANNPHP TTELQFSTPF ELLIAVLLSA QATDVSVNKA TAKLYPVANT 
PETLLALGVD GVKDYIKTIG LFNSKAENVI KTCRLLLEKH QGQVPEDRAA LEALPGVGRK 
TANVVLNTAF GWPTIAVDTH IFRVSNRTGF APGKNVEQVE EKLLKVVPAE FKVDCHHWLI 
LHGRYTCIAR KPRCGSCLIE DLCEFGEKID A