| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PC1_2018 |
|---|
| Symbol | |
|---|
| ID | 8132962 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pectobacterium carotovorum subsp. carotovorum PC1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_012917 |
|---|
| Strand | - |
|---|
| Start bp | 2317277 |
|---|
| End bp | 2319874 |
|---|
| Gene Length | 2598 bp |
|---|
| Protein Length | 865 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 50% |
|---|
| IMG OID | 644865308 |
|---|
| Product | MCP methyltransferase, CheR-type |
|---|
| Protein accession | YP_003017595 |
|---|
| Protein GI | 253688405 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG0520] Selenocysteine lyase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 6 |
|---|
| Plasmid unclonability p-value | 0.854917 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAATCAGA CGGTTCATAG AACCCTGAAA TTATGCACAG GCCCCAGCGG AGTGACGCCC
GATGAATCGG AAAAAGATTC CGAAACAATG CTAAAACTGT GGTCTGTTAT CGTTGACCAC
GATAATTTTG GATACCCGAC AATGAATAAT TCAGCACAGC ATCACTGCAA GGTTGTGTCA
GATCAACAAT GGTCATTGAG TACGTTCACG GAATTCTATG AGCGAGTCCT AGGATCCAGA
CTCTACAAAC CCTATGGAGA ACTGCTTGTC GACGAGATTC GAAAAGATAT TGATATCAGT
ACGCCGCCCA CCCGCATCCT GGAGGTAGCT TGTGGAACAG GCCGAATCAC CACTGCAATC
TATGAGGGGC TGGCAAAGCC ACTAAATATC CAACTCACCG CGACCGATTT GTCGAAGATC
GCAATTGACA TGGCACAGCG TGTGGTCAGT GATGAGATGA GGCGGGATGT CACCTTCATG
GCGGATGTGG ACATGGCCGA TATGCCTTTT GCAGACAACA GTTTTGACAT TATCGTGTGT
GGCTTTGGGC TGATGTTCCC GCCGGACAAA GTTCGGATCG CCCGTGAGTT TAAACGGGTG
CTACGTTCCG GTGGAAAAAT TTACGGCACG GTTTTTCATT ACAACGAGTT ATTCGATCTG
GCGCGGAGTG AATCGCAGAA ATATTTTGGT ATCCCCTCTG CAATTATGGA TGCAGCGCTT
AGCCTGAGCG ATCACTCCCC TATCACCCGG GCCTTCTCCC TTGAGGGACT GTGTCAGAAT
ACCGATGAGA GCGTCACCCT GTACCCCATG AGTTTTCAGC TTAGTGACGA TGATACGCGT
GAATTCCTCT TTAATGCCTG CATTCTTCTG GAAGAGTTCA ACCAGTGTGA CAGCGTCATG
CGAGAGCAAC ATCTGGATAC CATGCTCCGC GCTTTTAATG CGCAGGTTCC GGACCGACAC
TATCAGGTCG AAGCCTGGCT GATACGCGGA CAGGTCGATA AAACGGGCAA CACGTCTGTT
AAAAAGGCTC CGGGTCCTGA ATTTGCAGAG TTGGCCGCGT TTTATCAACT AACGCCAGAA
GCATTCAGGA AGAGAAAGAC ATTACCGCCC TTGCTGCAAA ATTCTCAACC ACTACAGCAG
TATCTGGCAA TGAAGCAGGC ATTCTTGTCC GAATATCCCA CATACCCTGA AGCCAAGGTT
GAGGCGCTTC GTGCACGCAA CTTTTCACGT ATGGAGTCTC GCAAGGTGAC CTATCTGGAC
CATGTAGGTG GCACGCTGGC ACCACTGTGT CTTATTGAAG GGAATTACCA GATGCTCAGG
AACACTATCC TGGGCAATCC ACACAGTGGT TCCAGGACTT CCGAGGAAAT TTATGAGCAG
GCCCGTCAGG CGATCTATCG CTTTTTCAAC TGTTCACCAG ATGAGTATGA AATCATCTTC
ACCGCTAACG CCAGTAGTGC TATCCGCCTT GTGGCGGAAT CGTTCCCCTT CGAAAATGGA
ACAGAAGTTC TGCTGACCAA AGATAACCAC ACCTCTGTCC ACAGCATTCG GGAATACGCT
AAATCAAAGG GGGCACAGGT AAAATATATT CCCCTAGACC AGGCTCTCCA GATCCCTGAC
AGTTCAATGC GGCGGGCACT GGATAATTTG TCACCCAGGC ATACCCACCT GCTGGCATAC
CCGGCACAGT CAAACGCCAC CGGTATCAGG CACAGCCTGA AGTGGGTTAA TGCCGCACAG
GAGAAGGGAG CCATGGTTTT GCTGGATGCA GCTGCGTTTG TCCCGCAGTC CAGACTGGAT
TATTCGCAAC ACCAGCCAGA TTTTATGACT ATCTCCTTTT ACAAGATGTT TGGTTATCCG
ACCGGGACTG GTTGTCTTAT TGCCAGGAGA TCATCGCTGG ATAAACTGGT GCCGCACTCC
TTTGCTGGCG GTGCCGTGTG CTACTACTCG GGACCGTGGT CTCCAACGGA ACGACTGCTG
TACCGTGATG ATGGTCGGCG ATTTGAGATC GGTACGCCAA ACTATGCCTC CTTCCATGCC
ATTGCCTTGG GATTTCAGTT TCTCTCCGAG TTGGGACTTG AAGAGGTTGA GAGACGTTCA
TCTGCTCTTG CGCGATGGCT TGAGCTGAAA CTGTCAGAAC TTCGGCACAG CACTAAACTC
GGTACCCCTC TCTGTCAGGT GTATGGACTG TCGGTGAAAA ATAAAGGGGC CACAGTGATG
CTAAATTTTT TCGACTGCAA TAACGCCATC TTCTCCCACG CCTTGATCAG GCAAGCTTTG
GAGAACGTGG GAATCATTGT GCGTAACGGG TGTTTCTGCA ATCTGGGCAC TGTTCAGCAG
GCGACATACA CTACTGCCGG AGCGGAACAC TGTGAGCTTG ATAAGTATGA AAAAATCCTC
GACTGCAAAA CCTTTGATGA CAAGATCCTC AGCAAGGGCC ACTGCGGAGC AATACGTGTT
TCACTTGGTC TGGGTTCGAA CTTCCGCGAC GTTTATTGTT TTTATCTGTT TGCGAAGGGG
CTTTTGAACA CAGAAGCAGA GAGTTTTGAG GTGGCAATGT CCAGTTCGAC CTTTCCGGCC
TTCATTCAAC ATCATTAG
|
|---|
| Protein sequence | MNQTVHRTLK LCTGPSGVTP DESEKDSETM LKLWSVIVDH DNFGYPTMNN SAQHHCKVVS
DQQWSLSTFT EFYERVLGSR LYKPYGELLV DEIRKDIDIS TPPTRILEVA CGTGRITTAI
YEGLAKPLNI QLTATDLSKI AIDMAQRVVS DEMRRDVTFM ADVDMADMPF ADNSFDIIVC
GFGLMFPPDK VRIAREFKRV LRSGGKIYGT VFHYNELFDL ARSESQKYFG IPSAIMDAAL
SLSDHSPITR AFSLEGLCQN TDESVTLYPM SFQLSDDDTR EFLFNACILL EEFNQCDSVM
REQHLDTMLR AFNAQVPDRH YQVEAWLIRG QVDKTGNTSV KKAPGPEFAE LAAFYQLTPE
AFRKRKTLPP LLQNSQPLQQ YLAMKQAFLS EYPTYPEAKV EALRARNFSR MESRKVTYLD
HVGGTLAPLC LIEGNYQMLR NTILGNPHSG SRTSEEIYEQ ARQAIYRFFN CSPDEYEIIF
TANASSAIRL VAESFPFENG TEVLLTKDNH TSVHSIREYA KSKGAQVKYI PLDQALQIPD
SSMRRALDNL SPRHTHLLAY PAQSNATGIR HSLKWVNAAQ EKGAMVLLDA AAFVPQSRLD
YSQHQPDFMT ISFYKMFGYP TGTGCLIARR SSLDKLVPHS FAGGAVCYYS GPWSPTERLL
YRDDGRRFEI GTPNYASFHA IALGFQFLSE LGLEEVERRS SALARWLELK LSELRHSTKL
GTPLCQVYGL SVKNKGATVM LNFFDCNNAI FSHALIRQAL ENVGIIVRNG CFCNLGTVQQ
ATYTTAGAEH CELDKYEKIL DCKTFDDKIL SKGHCGAIRV SLGLGSNFRD VYCFYLFAKG
LLNTEAESFE VAMSSSTFPA FIQHH
|
|---|
| |