Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PC1_1996 |
Symbol | |
ID | 8132940 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pectobacterium carotovorum subsp. carotovorum PC1 |
Kingdom | Bacteria |
Replicon accession | NC_012917 |
Strand | - |
Start bp | 2293151 |
End bp | 2293558 |
Gene Length | 408 bp |
Protein Length | 135 aa |
Translation table | 11 |
GC content | 53% |
IMG OID | 644865286 |
Product | acyl-CoA thioester hydrolase |
Protein accession | YP_003017573 |
Protein GI | 253688383 |
COG category | [I] Lipid transport and metabolism |
COG ID | [COG1607] Acyl-CoA hydrolase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | GTGTTACCAC AGGGCGAACT GGTTCTCCGC ACGCTGGCAA TGCCAGCCGA TACCAATGCG AACGGGGATA TTTTTGGCGG CTGGCTGATG TCACAAATGG ACATCGGCGG CGCAATTTTG GCGAAAGAAA TTGCCGAAGG GCGTGTCGTT ACCGTACGGG TTGATGGAAT GTCGTTCTTA AAACCTGTCG CCGTTGGCGA TGTGGTTTGC TGTTATGCGC GTTGTTTACG GACTGGTCGC AGTTCTATCA ACGTCAACGT TGAAGTCTGG GTAAAGAAAG TCTCGTCTGA GCCGATTGGC CAGCGCTATC GGGCGACCGA AGCGTTATTC ACCTACGTCG CGGTAGATGA AGAAGGTCAT CCACGTGAAT TGCCAGCGGG TAAAAGCAAT TTCACGCCAA GCGAGTAG
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Protein sequence | MLPQGELVLR TLAMPADTNA NGDIFGGWLM SQMDIGGAIL AKEIAEGRVV TVRVDGMSFL KPVAVGDVVC CYARCLRTGR SSINVNVEVW VKKVSSEPIG QRYRATEALF TYVAVDEEGH PRELPAGKSN FTPSE
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