Gene PC1_1996 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPC1_1996 
Symbol 
ID8132940 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePectobacterium carotovorum subsp. carotovorum PC1 
KingdomBacteria 
Replicon accessionNC_012917 
Strand
Start bp2293151 
End bp2293558 
Gene Length408 bp 
Protein Length135 aa 
Translation table11 
GC content53% 
IMG OID644865286 
Productacyl-CoA thioester hydrolase 
Protein accessionYP_003017573 
Protein GI253688383 
COG category[I] Lipid transport and metabolism 
COG ID[COG1607] Acyl-CoA hydrolase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGTTACCAC AGGGCGAACT GGTTCTCCGC ACGCTGGCAA TGCCAGCCGA TACCAATGCG 
AACGGGGATA TTTTTGGCGG CTGGCTGATG TCACAAATGG ACATCGGCGG CGCAATTTTG
GCGAAAGAAA TTGCCGAAGG GCGTGTCGTT ACCGTACGGG TTGATGGAAT GTCGTTCTTA
AAACCTGTCG CCGTTGGCGA TGTGGTTTGC TGTTATGCGC GTTGTTTACG GACTGGTCGC
AGTTCTATCA ACGTCAACGT TGAAGTCTGG GTAAAGAAAG TCTCGTCTGA GCCGATTGGC
CAGCGCTATC GGGCGACCGA AGCGTTATTC ACCTACGTCG CGGTAGATGA AGAAGGTCAT
CCACGTGAAT TGCCAGCGGG TAAAAGCAAT TTCACGCCAA GCGAGTAG
 
Protein sequence
MLPQGELVLR TLAMPADTNA NGDIFGGWLM SQMDIGGAIL AKEIAEGRVV TVRVDGMSFL 
KPVAVGDVVC CYARCLRTGR SSINVNVEVW VKKVSSEPIG QRYRATEALF TYVAVDEEGH
PRELPAGKSN FTPSE