| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PC1_1986 |
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| Symbol | oppB |
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| ID | 8132930 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pectobacterium carotovorum subsp. carotovorum PC1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012917 |
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| Strand | + |
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| Start bp | 2283664 |
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| End bp | 2284584 |
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| Gene Length | 921 bp |
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| Protein Length | 306 aa |
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| Translation table | 11 |
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| GC content | 50% |
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| IMG OID | 644865276 |
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| Product | oligopeptide transporter permease |
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| Protein accession | YP_003017563 |
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| Protein GI | 253688373 |
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| COG category | [E] Amino acid transport and metabolism
[P] Inorganic ion transport and metabolism |
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| COG ID | [COG0601] ABC-type dipeptide/oligopeptide/nickel transport systems, permease components |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.879407 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGTTAAAAT TTATTCTTCG CCGCTGTTTA GAGGCGATTC CAACACTATT TATCCTGATC
ACCATCTCGT TCTTTATGAT GCGATTGGCA CCCGGCAGCC CTTTTACCGG TGAGCGTAAT
TTACCGCCGG AAGTGATGGC GAATATTGAA GCCAAGTATC ATCTGAACGA CCCAATAATG
ACGCAGTACG GTAACTATTT ACTGCAACTG GTGCAGGGTG ATTTCGGTCC TTCTTTTAAA
TACAAAGACT ATTCTGTGAA CGATTTGGTC GCGACGTCTT TCCCCGTTTC TGCAAAATTG
GGGTTCGCGG CATTCGTTCT GGCGATTGTT TTTGGTGTGA GTGCTGGCGT GATCGCCGCA
CTGAATCAGA ATACGAAATG GGATTATACC GTGATGGGCT TTGCCATGAC GGGGGTGGTG
ATTCCCAGCT TTGTCGTCGC ACCGTTATTG GTGCTGATTT TTGCCATTAC GCTGCGTTGG
TTGCCCGGCG GTGGCTGGAA CGGCGGGGCA CCCAAATACA TGATTTTACC GATGGTGGCG
CTGTCCTTGT CTTATATCGC TAGCATCGCG CGTATTACCC GAGGATCTAT GATCGAGGTT
TTGCACTCTA ACTTTATCCG TACCGCGCGC GCCAAAGGGC TGCCGATGCG TCGCATCGTT
CTGCGCCACG CGTTAAAGCC TGCGTTGCTG CCGGTGCTTT CCTACATGGG GCCGGCGTTT
GTCGGGATTA TTACCGGCTC AATGGTGATT GAAACCATTT TTGGTTTACC GGGTATTGGG
CAACTTTTCG TGAACGGTGC GCTGAACCGT GACTACTCAC TGGTACTGAG CCTGACGATT
CTGGTCGGCG GCTTAACCAT TCTCTTTAAT GCGATCATTG ACGTGCTCTA CGCTGTTATC
GATCCGAAAA TTCGCTATTA A
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| Protein sequence | MLKFILRRCL EAIPTLFILI TISFFMMRLA PGSPFTGERN LPPEVMANIE AKYHLNDPIM
TQYGNYLLQL VQGDFGPSFK YKDYSVNDLV ATSFPVSAKL GFAAFVLAIV FGVSAGVIAA
LNQNTKWDYT VMGFAMTGVV IPSFVVAPLL VLIFAITLRW LPGGGWNGGA PKYMILPMVA
LSLSYIASIA RITRGSMIEV LHSNFIRTAR AKGLPMRRIV LRHALKPALL PVLSYMGPAF
VGIITGSMVI ETIFGLPGIG QLFVNGALNR DYSLVLSLTI LVGGLTILFN AIIDVLYAVI
DPKIRY
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