| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PC1_1984 |
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| Symbol | |
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| ID | 8132928 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pectobacterium carotovorum subsp. carotovorum PC1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012917 |
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| Strand | + |
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| Start bp | 2280111 |
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| End bp | 2281781 |
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| Gene Length | 1671 bp |
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| Protein Length | 556 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 644865274 |
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| Product | extracellular solute-binding protein family 5 |
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| Protein accession | YP_003017561 |
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| Protein GI | 253688371 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG4166] ABC-type oligopeptide transport system, periplasmic component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGCGTGGT ATCAAGACAG GGGCGTTTAT AAAGTGAAAA TTCGCAAAAC AAAACGATGC
TTTGTTACCA GTATGATTGC TGCCGCAGTG ATGGCGTCAT GCGTGAATGT TCAGGCTGCT
AATGTACCTG CCGGTGTTGA GCTGGCGAAA GAGCAGGTTC TGGTGAGAAA CAATGGCGCC
GAGGTGTCAT CACTGGATCC GCATAAAATA GAAGGTGTAC CGGAATCCAA CGTCGCACGC
GATTTATATG AAGGGCTGGT GATTTCCGAT CCTGACGGAC ACCCGATTCC TGGCGTGGCT
GAGCGATGGG AAAGCAGCGA TTTTAAAGTC TGGACATTCC ATTTACGTAA AGACGCCAAG
TGGTCAAATG GCGAACCGGT TACCGCGCAA GATTTCGTTT ATAGCTGGCA GCGTCTGGCC
GATCCGAAAA CTGTTTCTCC TTATGCCAGT TATTTGCAAT ATGGTCATCT GCTGAATATT
GATGACATTA TCGCCAGCAA GAAATCACCT GATACGTTAG GCGTAAAAGC GCTCGACGAC
CATACGCTGG AAGTGACATT AAGCGAGCCA ATCCCGTACT TTTATAAATT GCTGAATCAC
TCATCGATGT CTCCGGTCAA TAAAGCGACG GTGGAGAAAT TTGGTGATAA ATGGACTCAG
CCTGAAAACT GGGTAGGAAA TGGTGCTTAC CGGCTTAAAT CCTGGGTCGT GAATGAACGG
CTTGTGTTGG AACGTAATAG CCAATATTGG GATAACGCCA AGACGGTGAT TAATCAGGTC
ACCTATTTGC CGATTGCTTC TGAAGTCACG GATGTTAACC GCTATCGCGC GGGTGAAATT
GATGTCACCA ACAACAAACT ACCCATTGAG CTATTTCAGA AGCTAAAAAA AGAAATCCCA
CAAGAAGTTA ACATCAATCC CTACCTCTGC ACTTATTATT ACGAAATCAA TAATCAGAAA
CCGCCATTTA ACGATGTACG GGTGCGTACC GCTCTGCGCA TGGGGCTGGA TCAAGACATA
TTGACCAATA AAGTTAAAAA TCAGGGTGAT ATTCCTGCCT ATGGCTATAT TCCTCCCTTC
ACGGACGGCC TGAAAGCGCA TACGCCAGAG TGGTTTACCT GGCCGCAGGC GAAACGTAAT
GAAGAAGCGA AAAAACTGCT GGCGGAAGCG GGTTATACCG CAGAGAAGCC GCTAACGTTT
AATTTGCTTT ATAACTCGTC TGATTTGCAT AAAAAGATGG CGATCGCGGC GGCCTCGATC
TGGAAACAAA ATCTGGGCGT TGACGCGAAG TTGGAAAATC AGGAGTGGAA AACCTATCTC
AGCACGCGTC ATCAAGGCAA TTATGACGTT GCGCGTGCCG GATGGTGTGC GGACTATAAC
GAACCGACAT CGTTCCTGAA TAGTATGCTG TCAGACAGCA GTAACAACAC CGCACATTAT
AAGAGCGCGG AGTTCGACAA GCTGATGGAG CAGGCTGTTC AGGCGAAAAC GGACGATGAA
CGTGCACAAG TTTATCAGCA GGCCGAATCG CAGTTGGATA AAGATGCGGC GATCGTGCCG
GTTTATTACT ACGCGAACGC CAGGCTGATA AAACCTTATG TCGGCGGCAT TACCGGCAAG
GATCCTTTGG ATAATATACG GGTGAAGGAT CTCTATATCA TTAAGCATTA A
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| Protein sequence | MAWYQDRGVY KVKIRKTKRC FVTSMIAAAV MASCVNVQAA NVPAGVELAK EQVLVRNNGA
EVSSLDPHKI EGVPESNVAR DLYEGLVISD PDGHPIPGVA ERWESSDFKV WTFHLRKDAK
WSNGEPVTAQ DFVYSWQRLA DPKTVSPYAS YLQYGHLLNI DDIIASKKSP DTLGVKALDD
HTLEVTLSEP IPYFYKLLNH SSMSPVNKAT VEKFGDKWTQ PENWVGNGAY RLKSWVVNER
LVLERNSQYW DNAKTVINQV TYLPIASEVT DVNRYRAGEI DVTNNKLPIE LFQKLKKEIP
QEVNINPYLC TYYYEINNQK PPFNDVRVRT ALRMGLDQDI LTNKVKNQGD IPAYGYIPPF
TDGLKAHTPE WFTWPQAKRN EEAKKLLAEA GYTAEKPLTF NLLYNSSDLH KKMAIAAASI
WKQNLGVDAK LENQEWKTYL STRHQGNYDV ARAGWCADYN EPTSFLNSML SDSSNNTAHY
KSAEFDKLME QAVQAKTDDE RAQVYQQAES QLDKDAAIVP VYYYANARLI KPYVGGITGK
DPLDNIRVKD LYIIKH
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