Gene PC1_1983 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPC1_1983 
Symbol 
ID8132927 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePectobacterium carotovorum subsp. carotovorum PC1 
KingdomBacteria 
Replicon accessionNC_012917 
Strand
Start bp2276424 
End bp2279099 
Gene Length2676 bp 
Protein Length891 aa 
Translation table11 
GC content52% 
IMG OID644865273 
Productbifunctional acetaldehyde-CoA/alcohol dehydrogenase 
Protein accessionYP_003017560 
Protein GI253688370 
COG category[C] Energy production and conversion 
COG ID[COG1012] NAD-dependent aldehyde dehydrogenases
[COG1454] Alcohol dehydrogenase, class IV 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCCGTAA CCAACGTTGC TGAACTTAAC GCACTGGTCG AAAGAGTGAG AAAGGCACAG 
CAGGAATTTG CCACTTACAC TCAGGAACAA GTGGACAAGA TCTTCCGCGC TGCTGCACTC
GCTGCATCGG ATGCGCGTAT TCCGCTGGCA AAAATGGCGG TTGCCGAATC CGGTATGGGG
ATCGTGGAAG ATAAAGTCAT CAAAAACCAC TTCGCCTCTG AATACATTTA TAACGCCTAT
CAGGATGAAA AAACCTGCGG CGTCCTCTCA ACTGATGACA CTTTTGGTAC GATTACCATT
GCAGAGCCTA TTGGCCTGAT TTGCGGTATT GTTCCCACCA CCAACCCCAC TTCTACCGCG
ATTTTTAAAG CGCTGATTAG CCTGAAGACC CGTAACGGGA TTATCTTCTC TCCGCATCCG
CGTGCAAAAA ATGCGACCAA TAAAGCCGCA GACATTGTTC TGCAAGCGGC GATTGCAGCA
GGTGCACCGA AAGATATCAT CGGCTGGATC GATCAGCCTT CCGTTGAATT GTCCAACCAG
CTTATGCACC ATCCCGATAT CAACCTGATT CTGGCTACTG GTGGCCCAGG TATGGTGAAG
GCCGCGTACA GTTCCGGTAA ACCCGCAATC GGCGTAGGTG CAGGTAACAC GCCGGTTGTC
GTTGACGAAA CCGCAGATAT CAAACGTGCC GTTGCTTCTA TTCTGATGTC GAAAACTTTC
GATAACGGCG TAATTTGTGC GTCAGAGCAA TCAGTCATCG TCGTAGACAG CGTCTATGAC
GCCGTGCGTG AACGTTTTGC TACCCACGGC GGCTACATGC TGAAAGGCAA AGAACTGCAT
GCCGTACAGG GCATTTTGCT GAAGAACGGT TCACTGAATG CTGACATCGT GGGTCAACCC
GCACCGAAGA TTGCAGAAAT GGCGGGCATC AGCGTCCCTG CCAACACCAA AGTGCTGATC
GGTGAGGTCA CCGCGGTCGA TGAGTCCGAA CCATTTGCTC ATGAAAAACT GTCTCCGACG
CTGGCGATGT ACCGTGCGAA AGACTTCAAC GACGCCGTGA TTAAAGCGGA AAAATTGGTC
GCAATGGGTG GTATCGGTCA CACATCCTGC CTGTATACCG ATCAGGACAA TCAGCCTGAG
CGCGTGAATC ATTTCGGCAA TATGATGAAA ACCGCGCGTA TCCTGATTAA CACACCTGCG
TCTCAGGGGG GTATCGGCGA TCTCTACAAC TTCAAACTCG CTCCGTCTCT GACGCTGGGC
TGTGGCTCCT GGGGCGGAAA CTCCATCTCC GAAAACGTCG GTCCGAAGCA TTTGATCAAC
AAGAAAACGG TAGCCAAGCG AGCAGAGAAT ATGTTGTGGC ATAAACTTCC TAAATCCATT
TATTTCCGTC GCGGCTCACT GCCCATCGCG CTTGAAGAAG TGGCCTCCGA TGGTGCAAAA
CGCGCCTTTA TCGTAACTGA CCGCTTCCTG TTCAATAATG GCTATGTCGA TCAAGTGACA
TCTGTATTGA AACAGCACGG GCTGGAAACC GAAGTGTTCT TTGAAGTTGA AGCTGACCCA
ACGCTGAGCA TCGTGCGTAA AGGCGCCGAG CAAATGCACT CCTTCAAACC GGATGTGATC
ATTGCGCTGG GTGGTGGTTC ACCAATGGAT GCGGCGAAAA TCATGTGGGT GATGTATGAA
CACCCTACGA CACACTTCGA AGAGCTGGCG CTACGTTTCA TGGATATTCG TAAACGTATC
TACAAGTTCC CGAAAATGGG CGTCAAAGCC AAAATGGTGG CCATTACCAC CACCTCCGGT
ACGGGTTCCG AAGTGACGCC GTTTGCCGTG GTGACCGACG ATGCAACCGG GCAGAAATAT
CCGTTAGCGG ACTATGCGCT GACGCCAGAT ATGGCGATTG TTGATGCCAA TCTGGTGATG
AACATGCCGA AATCACTGTG TGCGTTTGGT GGACTCGATG CGGTAACACA CTCACTGGAA
GCCTATGTTT CCGTACTGGC AAACGAATAT TCAGACGGAC AGGCGTTGCA AGCGCTGAAG
CTGCTGAAAG AGAACCTGCC AGATAGCTAC CGCGACGGGG CGAAAAACCC GGTTGCCCGT
GAGCGCGTGC ATAACGCTGC GACAATTGCT GGTATCGCGT TTGCCAACGC CTTCCTCGGT
GTCTGCCACT CCATGGCGCA TAAGCTGGGC TCTGAATTCC ATATCCCGCA CGGCCTGGCT
AACGCCCTGC TGATCTCAAA CGTGATTCGT TATAACGCGA ACGATAACCC GACCAAGCAG
ACGACGTTCA GCCAGTATGA CCGTCCGCAG GCTCGCCGTC GCTACGCGGA AATAGCCGAC
CACCTGCGCT TGACCGCACC AAGCGATCGT ACCGCGCAGA AAATCGAGAA ATTGCTGAAC
TGGCTGGAAG AAATGAAGAC TGAGCTGGGG ATCCCCACCT CGATTCGTGA AGCTGGCGTA
CAGGAAGCCG ATTTCCTGGC TAAGGTAGAT AAGCTGTCAG AAGATGCATT CGACGATCAG
TGTACCGGGG CTAACCCACG TTACCCGCTG ATTTCCGAAC TGAAACAGAT TCTGCTGGAT
ACTTACTATG GTCGTAAGTT CTCTGAAGAG GCGAAAGCAG AAGTAGTTGA GCCTGTAGCA
AAAGCCGCTA AAACCGGTAA GAAAGCTGCA CATTAA
 
Protein sequence
MAVTNVAELN ALVERVRKAQ QEFATYTQEQ VDKIFRAAAL AASDARIPLA KMAVAESGMG 
IVEDKVIKNH FASEYIYNAY QDEKTCGVLS TDDTFGTITI AEPIGLICGI VPTTNPTSTA
IFKALISLKT RNGIIFSPHP RAKNATNKAA DIVLQAAIAA GAPKDIIGWI DQPSVELSNQ
LMHHPDINLI LATGGPGMVK AAYSSGKPAI GVGAGNTPVV VDETADIKRA VASILMSKTF
DNGVICASEQ SVIVVDSVYD AVRERFATHG GYMLKGKELH AVQGILLKNG SLNADIVGQP
APKIAEMAGI SVPANTKVLI GEVTAVDESE PFAHEKLSPT LAMYRAKDFN DAVIKAEKLV
AMGGIGHTSC LYTDQDNQPE RVNHFGNMMK TARILINTPA SQGGIGDLYN FKLAPSLTLG
CGSWGGNSIS ENVGPKHLIN KKTVAKRAEN MLWHKLPKSI YFRRGSLPIA LEEVASDGAK
RAFIVTDRFL FNNGYVDQVT SVLKQHGLET EVFFEVEADP TLSIVRKGAE QMHSFKPDVI
IALGGGSPMD AAKIMWVMYE HPTTHFEELA LRFMDIRKRI YKFPKMGVKA KMVAITTTSG
TGSEVTPFAV VTDDATGQKY PLADYALTPD MAIVDANLVM NMPKSLCAFG GLDAVTHSLE
AYVSVLANEY SDGQALQALK LLKENLPDSY RDGAKNPVAR ERVHNAATIA GIAFANAFLG
VCHSMAHKLG SEFHIPHGLA NALLISNVIR YNANDNPTKQ TTFSQYDRPQ ARRRYAEIAD
HLRLTAPSDR TAQKIEKLLN WLEEMKTELG IPTSIREAGV QEADFLAKVD KLSEDAFDDQ
CTGANPRYPL ISELKQILLD TYYGRKFSEE AKAEVVEPVA KAAKTGKKAA H