Gene PC1_1982 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPC1_1982 
Symbol 
ID8132926 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePectobacterium carotovorum subsp. carotovorum PC1 
KingdomBacteria 
Replicon accessionNC_012917 
Strand+ 
Start bp2275685 
End bp2276281 
Gene Length597 bp 
Protein Length198 aa 
Translation table11 
GC content46% 
IMG OID644865272 
Productthymidine kinase 
Protein accessionYP_003017559 
Protein GI253688369 
COG category[F] Nucleotide transport and metabolism 
COG ID[COG1435] Thymidine kinase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones7 
Plasmid unclonability p-value0.333313 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGGCCCAAC TTTATTTTTA TTATTCTGCA ATGAATGCAG GGAAATCGAC GGCGCTATTG 
CAGTCATCAT ATAACTACCA GGAGCGCGGG ATGCGTACGC TGGTGTTCAC TGCTGAAATA 
GATAATCGGC ACGGTGTGGG GATTGTAAGT TCACGAATCG GCCTTTCTTC TCCGGCATTA 
TTGTTTAATC CGCAGACATC CTTATTTGGA TTGCTGGAGA AAGAGCACCG AGCTCAGCCC 
GTAGATTGTG TATTAATTGA TGAATGTCAA TTTTTAACCC GCGAGCAGGT GAGTGAGCTT 
TCCGATGTTG TGGATCAATT AGACATCCCG GTATTGTGCT ACGGGTTGCG TACTGATTTT 
CGCGGTGATT TGTTTTCCGG GAGTCACTAT TTATTAGCAT GGGCAGATAA GCTGATTGAG 
TTAAAAACGG TCTGCCATTG TGGCCGTAAA GCTAACTGCG TATTGCGATT AGATGCGCAA 
GGTAATGCCG TCCACGAAGG GGAGCAGGTC GTTATTGGCG GCAATGAGAG CTATGTTTCC 
GTGTGTCGTA AACATTATAA AATTGCGCTG GGATTAACCC GTAAGGAAAG TGAGTAA
 
Protein sequence
MAQLYFYYSA MNAGKSTALL QSSYNYQERG MRTLVFTAEI DNRHGVGIVS SRIGLSSPAL 
LFNPQTSLFG LLEKEHRAQP VDCVLIDECQ FLTREQVSEL SDVVDQLDIP VLCYGLRTDF 
RGDLFSGSHY LLAWADKLIE LKTVCHCGRK ANCVLRLDAQ GNAVHEGEQV VIGGNESYVS 
VCRKHYKIAL GLTRKESE