Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PC1_1979 |
Symbol | |
ID | 8132923 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pectobacterium carotovorum subsp. carotovorum PC1 |
Kingdom | Bacteria |
Replicon accession | NC_012917 |
Strand | + |
Start bp | 2272406 |
End bp | 2273422 |
Gene Length | 1017 bp |
Protein Length | 338 aa |
Translation table | 11 |
GC content | 49% |
IMG OID | 644865269 |
Product | response regulator of RpoS |
Protein accession | YP_003017556 |
Protein GI | 253688366 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG0784] FOG: CheY-like receiver |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 7 |
Plasmid unclonability p-value | 0.46167 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGAACAAC CACTAGCGGG TAAGCATATT TTAGTCATTG ATGACGAGGC CGTTTTTCGA TCTGTGCTCG CTGGTTATCT GACTTCTCTT GGGGCTTCAG TTCAGGAAGC GATTAATGGA TTAGATGCGC TAAGTATTCT CGAACACTAT CAACCCGATT TAATGATTTG CGACCTGAAG ATGCCGACGA TGGGAGGCAT CGAGTTTCTT GAACGCCTGC GTTTGAAAGA TAACGATACG CCGATACTGA TTATTTCTGC AACCAGCCAG ATGGCGGACA TTGCCAAAGT CTTGCGTCTT GGTGTTCAGG ATGTGTTGCT GAAACCGATT CGTGATTATG CCCGCTTGCG TGAAGCCGTA ATGTCCTGCT TGTATCCTGA TATGTTCACT TCACAGCTGA ATGAGATGGA TCAACTGATG CAGGACATGG ATTCCCTCAA TCAATCACCT GAAGCAGTCA CCAAACTGCT TGCCCAGCTA CAGCCTCCCG TGCAGCAAAC ACTCGCTCAT TGCCGTGTTA ACTACCGCCA ATTGACGGCA GCGGAACATC CTGGACTGGT GTTGGATATT GCCGCACTTT CGGAGACGGA GTTGGCGTTC TATTGCCTGG ATGTCACTCA GGGTGTCAAT AACAATGGTA CGCTTGCAGC CTTACTGCTG CGAACGTTGT TCAATGGGCT GCTTCAGGAG CATTTAGCCG ATCAGCAACA CCGTTTGCCG TATCTGCCGA CGCTATTAAA GCAGGTCAAC CAGTTGCTGC GTCAGGCGAG TCTGGATGGA CGTTTTCCTT TGCTGGTGGG GTATTACCAT CGACAGTTAA AACAGCTGAT ACTGATTTCT GCTGGGCTAA ACGCGACGCT GAATGTTAAC GAACAGCAGA TAGCCCTAAA TAGCGGTATC CCTTTAGGCA CGCTTGAAGG CGCTTATCTC AATCAATTGA ATTATCAGTG TGAAGCGTGG CAATGTCAGA TATGGGGTGG CGGTGGTCGT TTACGGCTTA TGTTGACGGC AGAATAG
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Protein sequence | MEQPLAGKHI LVIDDEAVFR SVLAGYLTSL GASVQEAING LDALSILEHY QPDLMICDLK MPTMGGIEFL ERLRLKDNDT PILIISATSQ MADIAKVLRL GVQDVLLKPI RDYARLREAV MSCLYPDMFT SQLNEMDQLM QDMDSLNQSP EAVTKLLAQL QPPVQQTLAH CRVNYRQLTA AEHPGLVLDI AALSETELAF YCLDVTQGVN NNGTLAALLL RTLFNGLLQE HLADQQHRLP YLPTLLKQVN QLLRQASLDG RFPLLVGYYH RQLKQLILIS AGLNATLNVN EQQIALNSGI PLGTLEGAYL NQLNYQCEAW QCQIWGGGGR LRLMLTAE
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