Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PC1_1971 |
Symbol | |
ID | 8132914 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pectobacterium carotovorum subsp. carotovorum PC1 |
Kingdom | Bacteria |
Replicon accession | NC_012917 |
Strand | + |
Start bp | 2264362 |
End bp | 2264913 |
Gene Length | 552 bp |
Protein Length | 183 aa |
Translation table | 11 |
GC content | 55% |
IMG OID | 644865260 |
Product | hypothetical protein |
Protein accession | YP_003017548 |
Protein GI | 253688358 |
COG category | [C] Energy production and conversion |
COG ID | [COG0778] Nitroreductase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 7 |
Plasmid unclonability p-value | 0.3707 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGATGCTC TTGAATTGCT ATTGAATCGT CGTTCGGCCT CGCGCCTGAC CGCGCCAGCA CCGACGGGTG ACGCATTGAA TAACATTATC CACGCGGGTA TGCGTGCGCC GGATCATGGT GCCATGCAGC CGTGGCGCTT TTTTATGATC GAAAATGACG GTCTGGATCG TTTTAGTACG CTACTAACTC GTGCGGCGCA GCAGGAAGGG TTGGATGACG CCGGTATCGA TAAGGCACGT CAGGCCCCTT ATCGCGCCCC GCTGATTATT ACCGTTGTCG CGCATTGTGA AGAGAACCCG AAAGTCCCGC TTTGGGAGCA AATTGTCTCC GCTGGCTGTG CCGTTCAGGC TATGCAAATG GCTGCATTGG CTCAGGGCTT TAACGGTATC TGGCGTAGCG GTGCCTGGAC GCACAATGCG TTGGTACGCG AAGCGTTCAA CTGTCGTGAA CAGGATGAAA TTGTCGGTTT CCTCTATCTG GGGACGCCAC AGCTCAAAGC CTCGACTACG GTCACGCCGC TTGATACCGA CACGTTTGTT CACTACTTCT GA
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Protein sequence | MDALELLLNR RSASRLTAPA PTGDALNNII HAGMRAPDHG AMQPWRFFMI ENDGLDRFST LLTRAAQQEG LDDAGIDKAR QAPYRAPLII TVVAHCEENP KVPLWEQIVS AGCAVQAMQM AALAQGFNGI WRSGAWTHNA LVREAFNCRE QDEIVGFLYL GTPQLKASTT VTPLDTDTFV HYF
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