Gene PC1_1969 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPC1_1969 
SymbolansA 
ID8132912 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePectobacterium carotovorum subsp. carotovorum PC1 
KingdomBacteria 
Replicon accessionNC_012917 
Strand- 
Start bp2261071 
End bp2262090 
Gene Length1020 bp 
Protein Length339 aa 
Translation table11 
GC content52% 
IMG OID644865258 
Productcytoplasmic asparaginase I 
Protein accessionYP_003017546 
Protein GI253688356 
COG category[E] Amino acid transport and metabolism
[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0252] L-asparaginase/archaeal Glu-tRNAGln amidotransferase subunit D 
TIGRFAM ID[TIGR00519] L-asparaginases, type I 


Plasmid Coverage information

Num covering plasmid clones3 
Plasmid unclonability p-value0.0253632 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCGAAAGA AATCCATTTA TGTCGCCTAC ACGGGCGGCA CCATCGGCAT GCAGCGATCT 
GCGAATGGCT ATGTACCGGT ATCCGGTCAT TTACAGCAGC AGTTGGCAAA AATGCCCGAA 
TTCCATCGCG AAGAGATGCC ATCGTTTACG ATTCATGAAT ATGAACCGCT GATCGATTCG 
TCCGACATGA CGCCAGCAGA CTGGCAATCC ATCGCGGACG ATATTCAAGA CCACTACGAT 
GATTACGACG GTTTCGTGAT TCTGCATGGT ACTGACACGA TGGCGTTCAC CGCCTCTGCG 
CTCTCATTTA TGCTGGAAAA TCTGGCCAAG CCGGTTATCG TGACAGGGTC ACAAATTCCA 
TTAGCGGAAT TGCGCTCGGA CGGCCAGACC AACCTGCTGA ACGCGCTATA CGTTGCCGCT 
AATCATCCGA TTAATGAAGT CGCCCTCTTC TTCAATAACA AACTGCTACG CGGCAATCGC 
ACCACCAAAG CCCATGCGGA TGGTTTTGAT GCTTTCGCTT CCCCTAATTA CCCGCCACTG 
CTGGAAGCGG GTATCCATAT TCGTCGGTTG GCACCCACCG TAGAATGCAA CAACTGCCCG 
CCGCTGAAAG TGCATCACAT TACGCCACAG CCTATCGGGG TGATTACGAT TTATCCCGGC 
ATTTCTGCCG ATGTCATCAG TAATTTCCTC CGCCAACCGG TGAAGGCGCT CATCCTGCGC 
TCCTACGGCG TTGGTAACGC ACCGCAAAGT CCCGGCTTGC TGCACGAATT ACGTGAAGCC 
TCCGCGCGCG GCATTGTGGT CGTCAACCTG ACGCAGTGCA TTTCCGGGCG TGTGAATATG 
GGCGGCTATG CGACAGGCAA TGCGCTGGCG CATGCGGGAG TGATCAGTGG CTTTGATATG 
ACCGTTGAAG CCGCATTAAC CAAACTGCAT TACTTATTGA GCCAGCAGGA TTTAAGCGCC 
GATGAAATTC GCCATTTAAT GCAGCAGAAC CTGCATGGAG AATTGAGCGA TAAAGATTGA
 
Protein sequence
MRKKSIYVAY TGGTIGMQRS ANGYVPVSGH LQQQLAKMPE FHREEMPSFT IHEYEPLIDS 
SDMTPADWQS IADDIQDHYD DYDGFVILHG TDTMAFTASA LSFMLENLAK PVIVTGSQIP 
LAELRSDGQT NLLNALYVAA NHPINEVALF FNNKLLRGNR TTKAHADGFD AFASPNYPPL 
LEAGIHIRRL APTVECNNCP PLKVHHITPQ PIGVITIYPG ISADVISNFL RQPVKALILR 
SYGVGNAPQS PGLLHELREA SARGIVVVNL TQCISGRVNM GGYATGNALA HAGVISGFDM 
TVEAALTKLH YLLSQQDLSA DEIRHLMQQN LHGELSDKD